RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 IFIT1P09914 478 aaKnown RBP10.12□□□□□ -0.79
CLDND1-205ENST00000502288 FGFR2P21802 821 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 CCND3P30281 292 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-205ENST00000502288 RGS3P49796 1198 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 CCDC27Q2M243 656 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 RABL6Q3YEC7 729 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-205ENST00000502288 METTL24Q5JXM2 366 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 SH3BP5LQ7L8J4 393 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 KAZALD1Q96I82 304 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 SENP6Q9GZR1 1112 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-205ENST00000502288 OSBPL5Q9H0X9 879 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-205ENST00000502288 ASCC2Q9H1I8 757 aaPredicted RBP10.12□□□□□ -0.79
CLDND1-205ENST00000502288 RAPGEFL1Q9UHV5 662 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 BDP1A6H8Y1 2624 aa10.12□□□□□ -0.79
CLDND1-205ENST00000502288 DDTLA6NHG4 134 aaPredicted RBP10.11□□□□□ -0.79
CLDND1-205ENST00000502288 F6X3S4 739 aa10.11□□□□□ -0.79
CLDND1-205ENST00000502288 MSCO60682 206 aa10.11□□□□□ -0.79
CLDND1-205ENST00000502288 NPM3O75607 178 aaKnown RBP10.11□□□□□ -0.79
CLDND1-205ENST00000502288 ZKSCAN1P17029 563 aaPredicted RBP10.11□□□□□ -0.79
CLDND1-205ENST00000502288 HOXA7P31268 230 aaPredicted RBP10.11□□□□□ -0.79
CLDND1-205ENST00000502288 SPP2Q13103 211 aa10.11□□□□□ -0.79
CLDND1-205ENST00000502288 LRRC24Q50LG9 513 aa10.11□□□□□ -0.79
CLDND1-205ENST00000502288 C9orf50Q5SZB4 431 aa10.11□□□□□ -0.79
CLDND1-205ENST00000502288 ZNF280CQ8ND82 737 aa10.11□□□□□ -0.79
CLDND1-205ENST00000502288 ATXN2LQ8WWM7 1075 aaKnown RBP10.11□□□□□ -0.79
CLDND1-205ENST00000502288 UTYO14607 1347 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 GAKO14976 1311 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 SYNGAP1Q96PV0 1343 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 VAMP4O75379 141 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 LDHBP07195 334 aaKnown RBP10.1□□□□□ -0.79
CLDND1-205ENST00000502288 PRDX5P30044 214 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 MAPK4P31152 587 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 ZEB1P37275 1124 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-205ENST00000502288 RGS2P41220 211 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 PUM3Q15397 648 aaKnown RBP10.1□□□□□ -0.79
CLDND1-205ENST00000502288 MORN1Q5T089 497 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 GPRC5AQ8NFJ5 357 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 LPAR1Q92633 364 aa10.1□□□□□ -0.79
CLDND1-205ENST00000502288 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
CLDND1-205ENST00000502288 IL16Q14005 1332 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 DNM1LO00429 736 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 HMGCS2P54868 508 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 MAP3K12Q12852 859 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 PDE3AQ14432 1141 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
CLDND1-205ENST00000502288 CCDC84Q86UT8 332 aaPredicted RBP10.09□□□□□ -0.79
CLDND1-205ENST00000502288 ZSCAN29Q8IWY8 852 aaPredicted RBP10.09□□□□□ -0.79
CLDND1-205ENST00000502288 LPIN2Q92539 896 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 SUCLG2Q96I99 432 aa10.09□□□□□ -0.79
CLDND1-205ENST00000502288 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.09□□□□□ -0.79
CLDND1-205ENST00000502288 USP17L5A8MUK1 530 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 SEMA3EO15041 775 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 NBPF7P0C2Y1 421 aaPredicted RBP10.08□□□□□ -0.8
CLDND1-205ENST00000502288 CAP2P40123 477 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 RTP1P59025 263 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 SNX17Q15036 470 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 C1orf53Q5VUE5 145 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 USP38Q8NB14 1042 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
CLDND1-205ENST00000502288 APBA2Q99767 749 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 WDR18Q9BV38 432 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 SRCIN1Q9C0H9 1055 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 AS3MTQ9HBK9 375 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 RBPJLQ9UBG7 517 aa10.08□□□□□ -0.8
CLDND1-205ENST00000502288 DDX20Q9UHI6 824 aaKnown RBP10.08□□□□□ -0.8
CLDND1-205ENST00000502288 PLXNA1Q9UIW2 1896 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 MAP4K4O95819 1239 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 SLURP2P0DP57 97 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 SLC5A1P13866 664 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 ATN1P54259 1190 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 HERVK_113P62684 666 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 IRX3P78415 501 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 GRIN2CQ14957 1233 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 CCL14Q16627 93 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 Q3C1V9 767 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 SLC39A5Q6ZMH5 540 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 GPR142Q7Z601 462 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 PLEKHH3Q7Z736 793 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 WWC1Q8IX03 1113 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 SLF2Q8IX21 1173 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 ZGPATQ8N5A5 531 aaKnown RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 GTF3C2Q8WUA4 911 aaPredicted RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 BADQ92934 168 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 ASB2Q96Q27 587 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 BICC1Q9H694 974 aaKnown RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.07□□□□□ -0.81e-6■■■□□ 18.4
CLDND1-205ENST00000502288 TXNRD2Q9NNW7 524 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 DDX4Q9NQI0 724 aaKnown RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 GNL3LQ9NVN8 582 aaKnown RBP10.07□□□□□ -0.8
CLDND1-205ENST00000502288 DENND2AQ9ULE3 1009 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 SIPA1L1O43166 1804 aa10.07□□□□□ -0.8
CLDND1-205ENST00000502288 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.06□□□□□ -0.8
CLDND1-205ENST00000502288 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.06□□□□□ -0.8
CLDND1-205ENST00000502288 C19orf81C9J6K1 198 aa10.06□□□□□ -0.8
CLDND1-205ENST00000502288 HOXC6P09630 235 aa10.06□□□□□ -0.8
CLDND1-205ENST00000502288 BACE1P56817 501 aa10.06□□□□□ -0.8
CLDND1-205ENST00000502288 ERVK-9P63128 1117 aa10.06□□□□□ -0.8
CLDND1-205ENST00000502288 ERVK-24P63145 666 aa10.06□□□□□ -0.8
CLDND1-205ENST00000502288 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms