RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
MED28-202ENST00000499786 SF3B3Q15393 1217 aaKnown RBP8.36□□□□□ -1.07
MED28-202ENST00000499786 TXNRD1Q16881 649 aa8.36□□□□□ -1.07
MED28-202ENST00000499786 TSGA10IPQ3SY00 556 aa8.36□□□□□ -1.07
MED28-202ENST00000499786 POTEAQ6S8J7 498 aa8.36□□□□□ -1.07
MED28-202ENST00000499786 DDX46Q7L014 1031 aaKnown RBP8.36□□□□□ -1.07
MED28-202ENST00000499786 FLAD1Q8NFF5 587 aa8.36□□□□□ -1.07
MED28-202ENST00000499786 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
MED28-202ENST00000499786 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.36□□□□□ -1.07
MED28-202ENST00000499786 TNS1Q9HBL0 1735 aaKnown RBP8.36□□□□□ -1.07
MED28-202ENST00000499786 MED23Q9ULK4 1368 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 MYH7P12883 1935 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 PIK3CDO00329 1044 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 AVPP01185 164 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 FSHRP23945 695 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 ADORA1P30542 326 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 HSPA4P34932 840 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 VPS37DQ86XT2 251 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 CCDC125Q86Z20 511 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 RPGRQ92834 1020 aaKnown RBP8.35□□□□□ -1.07
MED28-202ENST00000499786 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
MED28-202ENST00000499786 ANP32EQ9BTT0 268 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 LSG1Q9H089 658 aaKnown RBP8.35□□□□□ -1.07
MED28-202ENST00000499786 SEC31BQ9NQW1 1179 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 HELLSQ9NRZ9 838 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 LRRC4BQ9NT99 713 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 TFCP2L1Q9NZI6 479 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 HMG20BQ9P0W2 317 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 A0A1B0GUL6 1792 aa8.35□□□□□ -1.07
MED28-202ENST00000499786 PLSCR1O15162 318 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 RNF113AO15541 343 aaKnown RBP8.34□□□□□ -1.07
MED28-202ENST00000499786 PSMA5P28066 241 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 ARID4AP29374 1257 aaPredicted RBP8.34□□□□□ -1.07
MED28-202ENST00000499786 NEK4P51957 841 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 CHRNDQ07001 517 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 NNTQ13423 1086 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 SF3B2Q13435 895 aaKnown RBP8.34□□□□□ -1.07
MED28-202ENST00000499786 KRT32Q14532 448 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 NFIXQ14938 502 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 MCMDC2Q4G0Z9 681 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 CAVIN4Q5BKX8 364 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 SLC10A5Q5PT55 438 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 VGLL2Q8N8G2 317 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 HPS1Q92902 700 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 ZNF512BQ96KM6 892 aaPredicted RBP8.34□□□□□ -1.07
MED28-202ENST00000499786 FAM227BQ96M60 508 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 KIF2CQ99661 725 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 ANKRD2Q9GZV1 360 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 BSDC1Q9NW68 430 aaPredicted RBP8.34□□□□□ -1.07
MED28-202ENST00000499786 CHMP5Q9NZZ3 219 aa8.34□□□□□ -1.07
MED28-202ENST00000499786 RBM8AQ9Y5S9 174 aaKnown RBP8.34□□□□□ -1.07
MED28-202ENST00000499786 TNRC6CQ9HCJ0 1690 aaKnown RBP8.34□□□□□ -1.08
MED28-202ENST00000499786 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
MED28-202ENST00000499786 UBE4AQ14139 1066 aa8.33□□□□□ -1.08
MED28-202ENST00000499786 LAPTM4AQ15012 233 aa8.33□□□□□ -1.08
MED28-202ENST00000499786 CCDC102BQ68D86 513 aa8.33□□□□□ -1.08
MED28-202ENST00000499786 PRPF40BQ6NWY9 871 aaKnown RBP8.33□□□□□ -1.08
MED28-202ENST00000499786 EDC3Q96F86 508 aaKnown RBP8.33□□□□□ -1.08
MED28-202ENST00000499786 WASF2Q9Y6W5 498 aa8.33□□□□□ -1.08
MED28-202ENST00000499786 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 DGAT1O75907 488 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 GYS1P13807 737 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 CASTP20810 708 aaKnown RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 FGFR2P21802 821 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 ZAP70P43403 619 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 RPS8P62241 208 aaKnown RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 MAP3K12Q12852 859 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 PPP1R26Q5T8A7 1209 aaPredicted RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 SMIM5Q71RC9 77 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 APPBP2Q92624 585 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 RBM17Q96I25 401 aaKnown RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 JAKMIP1Q96N16 626 aaKnown RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 RGS17Q9UGC6 210 aaPredicted RBP8.32□□□□□ -1.08
MED28-202ENST00000499786 SNX14Q9Y5W7 946 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 CYP46A1Q9Y6A2 500 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 MYH13Q9UKX3 1938 aa8.32□□□□□ -1.08
MED28-202ENST00000499786 DUOX1Q9NRD9 1551 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 LILRA1O75019 489 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 FRAT2O75474 233 aaPredicted RBP8.31□□□□□ -1.08
MED28-202ENST00000499786 TAF5LO75529 589 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 SERPINB2P05120 415 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 MCAMP43121 646 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 PHKA1P46020 1223 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 PTH1RQ03431 593 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 DHX9Q08211 1270 aaKnown RBP8.31□□□□□ -1.08
MED28-202ENST00000499786 GRAPQ13588 217 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 SLFNL1Q499Z3 407 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 CREB3L3Q68CJ9 461 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 ZNF589Q86UQ0 364 aaPredicted RBP8.31□□□□□ -1.08
MED28-202ENST00000499786 RNF135Q8IUD6 432 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 NLGN1Q8N2Q7 840 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 SPATA5Q8NB90 893 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 GRAPLQ8TC17 118 aaPredicted RBP8.31□□□□□ -1.08
MED28-202ENST00000499786 MAP4K1Q92918 833 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 IL17RAQ96F46 866 aa8.31□□□□□ -1.08
MED28-202ENST00000499786 DSCC1Q9BVC3 393 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms