RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 APOA5Q6Q788 366 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 HOMER1Q86YM7 354 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 MPHOSPH8Q99549 860 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 ALG1Q9BT22 464 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 MYL10Q9BUA6 226 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 MROH7-TTC4A0A0A0MT08 1334 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 MBD4O95243 580 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 CTDSPL2Q05D32 466 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 EPB41L4AQ9HCS5 686 aaPredicted RBP18.86■□□□□ 0.61
COL6A1-206ENST00000498614 DNAI1Q9UI46 699 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 ARAP2Q8WZ64 1704 aa18.86■□□□□ 0.61
COL6A1-206ENST00000498614 ETF1P62495 437 aaKnown RBP18.85■□□□□ 0.61
COL6A1-206ENST00000498614 ANO1Q5XXA6 986 aa18.85■□□□□ 0.61
COL6A1-206ENST00000498614 NFXL1Q6ZNB6 911 aa18.85■□□□□ 0.61
COL6A1-206ENST00000498614 DPF2Q92785 391 aa18.85■□□□□ 0.61
COL6A1-206ENST00000498614 ARMT1Q9H993 441 aa18.85■□□□□ 0.61
COL6A1-206ENST00000498614 ERICH4A6NGS2 130 aa18.85■□□□□ 0.61
COL6A1-206ENST00000498614 GNPATO15228 680 aa18.85■□□□□ 0.61
COL6A1-206ENST00000498614 WDHD1O75717 1129 aaPredicted RBP18.85■□□□□ 0.61
COL6A1-206ENST00000498614 FANCGO15287 622 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 NRDCO43847 1150 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 CMA1P23946 247 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 IFNL3Q8IZI9 196 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 IGDCC4Q8TDY8 1250 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 NAPBQ9H115 298 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 PATL2C9JE40 543 aaKnown RBP18.84■□□□□ 0.61
COL6A1-206ENST00000498614 ZBTB43O43298 467 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 MARCKSP29966 332 aaPredicted RBP18.84■□□□□ 0.61
COL6A1-206ENST00000498614 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 TMEM67Q5HYA8 995 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 LY9Q9HBG7 655 aa18.84■□□□□ 0.61
COL6A1-206ENST00000498614 IKBKBO14920 756 aa18.83■□□□□ 0.61
COL6A1-206ENST00000498614 PNMA6AP0CW24 399 aaPredicted RBP18.83■□□□□ 0.61
COL6A1-206ENST00000498614 KRT40Q6A162 431 aa18.83■□□□□ 0.61
COL6A1-206ENST00000498614 TRIM65Q6PJ69 517 aa18.83■□□□□ 0.61
COL6A1-206ENST00000498614 VPS37DQ86XT2 251 aa18.83■□□□□ 0.61
COL6A1-206ENST00000498614 TMEM87BQ96K49 555 aa18.83■□□□□ 0.61
COL6A1-206ENST00000498614 UTP14AQ9BVJ6 771 aaKnown RBP18.83■□□□□ 0.61
COL6A1-206ENST00000498614 TACC3Q9Y6A5 838 aa18.83■□□□□ 0.61
COL6A1-206ENST00000498614 PHLPP2Q6ZVD8 1323 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 ECM29Q5VYK3 1845 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 GOLGA8AA7E2F4 631 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 CDKL5O76039 1030 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 TUBB4AP04350 444 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 GOLGA8FQ08AF8 430 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 GOLGA8DPQ0D2H9 430 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 DHX8Q14562 1220 aaKnown RBP18.83■□□□□ 0.6
COL6A1-206ENST00000498614 PTPN21Q16825 1174 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 TXNRD1Q16881 649 aa18.83■□□□□ 0.6
COL6A1-206ENST00000498614 NOL10Q9BSC4 688 aaKnown RBP18.83■□□□□ 0.6
COL6A1-206ENST00000498614 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 PRKAB2O43741 272 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 PLA2G4AP47712 749 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 BCAMP50895 628 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 GNL2Q13823 731 aaKnown RBP18.82■□□□□ 0.6
COL6A1-206ENST00000498614 CPLX2Q6PUV4 134 aaKnown RBP18.82■□□□□ 0.6
COL6A1-206ENST00000498614 STK11IPQ8N1F8 1099 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 ZSWIM5Q9P217 1185 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 DOCK2Q92608 1830 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 CHD4Q14839 1912 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 CCDC66A2RUB6 948 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
COL6A1-206ENST00000498614 ALX1Q15699 326 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 AK7Q96M32 723 aa18.82■□□□□ 0.6
COL6A1-206ENST00000498614 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
COL6A1-206ENST00000498614 IFIT3O14879 490 aaKnown RBP18.81■□□□□ 0.6
COL6A1-206ENST00000498614 IARSP41252 1262 aaKnown RBP18.81■□□□□ 0.6
COL6A1-206ENST00000498614 UBASH3AP57075 661 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 NTRK3Q16288 839 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 FAM217BQ9NTX9 383 aaPredicted RBP18.81■□□□□ 0.6
COL6A1-206ENST00000498614 GSG1L2A8MUP6 293 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 ZRANB2O95218 330 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL6A1-206ENST00000498614 SERPINC1P01008 464 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 SYKP43405 635 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 RRP12Q5JTH9 1297 aaKnown RBP18.81■□□□□ 0.6
COL6A1-206ENST00000498614 REXO1L1PQ8IX06 675 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 LCORLQ8N3X6 602 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 UBXN4Q92575 508 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 TMX1Q9H3N1 280 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 TUBE1Q9UJT0 475 aa18.81■□□□□ 0.6
COL6A1-206ENST00000498614 TMEM232C9JQI7 657 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 CCP110O43303 1012 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 LY75O60449 1722 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 URI1O94763 535 aaPredicted RBP18.8■□□□□ 0.6
COL6A1-206ENST00000498614 CAMTA2O94983 1202 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 COL5A3P25940 1745 aaPredicted RBP18.8■□□□□ 0.6
COL6A1-206ENST00000498614 SLC39A14Q15043 492 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 ZKSCAN3Q9BRR0 538 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 TOMM22Q9NS69 142 aa18.8■□□□□ 0.6
COL6A1-206ENST00000498614 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
COL6A1-206ENST00000498614 PNOCQ13519 176 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 CCDC152Q4G0S7 254 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 SGMS1Q86VZ5 419 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 MIGA1Q8NAN2 632 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 SLC26A6Q9BXS9 759 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 IQSEC3Q9UPP2 1182 aaPredicted RBP18.79■□□□□ 0.6
COL6A1-206ENST00000498614 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL6A1-206ENST00000498614 SLC12A7Q9Y666 1083 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 ZBTB22O15209 634 aa18.79■□□□□ 0.6
COL6A1-206ENST00000498614 TADA3O75528 432 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms