RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 TPTE2Q6XPS3 522 aa6.89□□□□□ -1.31
NF1-217ENST00000498569 SYNE4Q8N205 404 aa6.89□□□□□ -1.31
NF1-217ENST00000498569 C7orf43Q8WVR3 580 aa6.89□□□□□ -1.31
NF1-217ENST00000498569 NDUFB9Q9Y6M9 179 aa6.89□□□□□ -1.31
NF1-217ENST00000498569 KDM3BQ7LBC6 1761 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 GNAT3A8MTJ3 354 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 TRAF5O00463 557 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 DIAPH1O60610 1272 aaKnown RBP6.88□□□□□ -1.31
NF1-217ENST00000498569 PLA2G4AP47712 749 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 PIP4K2AP48426 406 aaPredicted RBP6.88□□□□□ -1.31
NF1-217ENST00000498569 CLEC4GQ6UXB4 293 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 USP50Q70EL3 339 aaPredicted RBP6.88□□□□□ -1.31
NF1-217ENST00000498569 LARGE2Q8N3Y3 721 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 GAS2L2Q8NHY3 880 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 PSMD1Q99460 953 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 NIP7Q9Y221 180 aaKnown RBP eCLIP6.88□□□□□ -1.31
NF1-217ENST00000498569 CENPFP49454 3210 aa6.88□□□□□ -1.31
NF1-217ENST00000498569 TAF1P21675 1872 aa6.87□□□□□ -1.31
NF1-217ENST00000498569 BTBD11A6QL63 1104 aa6.87□□□□□ -1.31
NF1-217ENST00000498569 ATXN7O15265 892 aaPredicted RBP6.87□□□□□ -1.31
NF1-217ENST00000498569 CELF2O95319 508 aaKnown RBP6.87□□□□□ -1.31
NF1-217ENST00000498569 ITGB7P26010 798 aa6.87□□□□□ -1.31
NF1-217ENST00000498569 SCNN1DP51172 638 aa6.87□□□□□ -1.31
NF1-217ENST00000498569 BRPF1P55201 1214 aaPredicted RBP6.87□□□□□ -1.31
NF1-217ENST00000498569 FMR1Q06787 632 aaKnown RBP eCLIP6.87□□□□□ -1.31
NF1-217ENST00000498569 NIM1KQ8IY84 436 aa6.87□□□□□ -1.31
NF1-217ENST00000498569 RPGRQ92834 1020 aaKnown RBP6.87□□□□□ -1.31
NF1-217ENST00000498569 TMX4Q9H1E5 349 aaPredicted RBP6.87□□□□□ -1.31
NF1-217ENST00000498569 ZNF408Q9H9D4 720 aa6.87□□□□□ -1.31
NF1-217ENST00000498569 DNAAF2Q9NVR5 837 aaKnown RBP6.87□□□□□ -1.31
NF1-217ENST00000498569 SNED1Q8TER0 1413 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 KRTAP9-6A0A140TA67 174 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 U2SURPO15042 1029 aaKnown RBP6.86□□□□□ -1.31
NF1-217ENST00000498569 EPS15P42566 896 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
NF1-217ENST00000498569 USP4Q13107 963 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 CST9Q5W186 159 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 CCDC85AQ96PX6 553 aaPredicted RBP6.86□□□□□ -1.31
NF1-217ENST00000498569 ZCCHC2Q9C0B9 1178 aaKnown RBP6.86□□□□□ -1.31
NF1-217ENST00000498569 NYXQ9GZU5 481 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 ADARB2Q9NS39 739 aaKnown RBP6.86□□□□□ -1.31
NF1-217ENST00000498569 DOLKQ9UPQ8 538 aa6.86□□□□□ -1.31
NF1-217ENST00000498569 COL3A1P02461 1466 aaPredicted RBP6.85□□□□□ -1.31
NF1-217ENST00000498569 ABCC12Q96J65 1359 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 KLRG2A4D1S0 409 aaPredicted RBP6.85□□□□□ -1.31
NF1-217ENST00000498569 TCERG1O14776 1098 aaKnown RBP6.85□□□□□ -1.31
NF1-217ENST00000498569 PPIP5K2O43314 1243 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 SOX10P56693 466 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 SAPCD2Q86UD0 394 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 IL17REQ8NFR9 667 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 GLIS2Q9BZE0 524 aaPredicted RBP6.85□□□□□ -1.31
NF1-217ENST00000498569 ETNK1Q9HBU6 452 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 CEP126Q9P2H0 1117 aa6.85□□□□□ -1.31
NF1-217ENST00000498569 RIC1Q4ADV7 1423 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 MKI67P46013 3256 aaKnown RBP6.84□□□□□ -1.31
NF1-217ENST00000498569 CEMIPQ8WUJ3 1361 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 KCNQ3O43525 872 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 SNRPA1P09661 255 aaKnown RBP6.84□□□□□ -1.31
NF1-217ENST00000498569 MAPTP10636 758 aaKnown RBP6.84□□□□□ -1.31
NF1-217ENST00000498569 HSPA5P11021 654 aaKnown RBP6.84□□□□□ -1.31
NF1-217ENST00000498569 ATP4AP20648 1035 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 NOGQ13253 232 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 PRRT3Q5FWE3 981 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 KIF6Q6ZMV9 814 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 FCHSD1Q86WN1 690 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 BANK1Q8NDB2 785 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 RBM17Q96I25 401 aaKnown RBP6.84□□□□□ -1.31
NF1-217ENST00000498569 HHIPL1Q96JK4 782 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 PLVAPQ9BX97 442 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 NIFKQ9BYG3 293 aaKnown RBP6.84□□□□□ -1.31
NF1-217ENST00000498569 GPRC5DQ9NZD1 345 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 USP16Q9Y5T5 823 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 PSME4Q14997 1843 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 LRRC37AA6NMS7 1700 aa6.84□□□□□ -1.31
NF1-217ENST00000498569 NPC1L1Q9UHC9 1359 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 CDHR2Q9BYE9 1310 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 CEP290O15078 2479 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 DCDC2BA2VCK2 349 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 PRAMEF22A3QJZ6 481 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 GMPSP49915 693 aaPredicted RBP6.83□□□□□ -1.32
NF1-217ENST00000498569 HUNKP57058 714 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 AOC3Q16853 763 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 RSPO4Q2I0M5 234 aaPredicted RBP6.83□□□□□ -1.32
NF1-217ENST00000498569 CRY2Q49AN0 593 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 CC2D1BQ5T0F9 858 aaKnown RBP6.83□□□□□ -1.32
NF1-217ENST00000498569 ZNF468Q5VIY5 522 aaPredicted RBP6.83□□□□□ -1.32
NF1-217ENST00000498569 RTF1Q92541 710 aaKnown RBP6.83□□□□□ -1.32
NF1-217ENST00000498569 TRIM11Q96F44 468 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 TIMELESSQ9UNS1 1208 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 BRCA2P51587 3418 aa6.83□□□□□ -1.32
NF1-217ENST00000498569 IBTKQ9P2D0 1353 aaPredicted RBP6.82□□□□□ -1.32
NF1-217ENST00000498569 KIF7Q2M1P5 1343 aa6.82□□□□□ -1.32
NF1-217ENST00000498569 HTTP42858 3142 aa6.82□□□□□ -1.32
NF1-217ENST00000498569 KHNYNO15037 678 aaKnown RBP6.82□□□□□ -1.32
NF1-217ENST00000498569 GPR37L1O60883 481 aa6.82□□□□□ -1.32
NF1-217ENST00000498569 FAM157BP0CG42 384 aa6.82□□□□□ -1.32
NF1-217ENST00000498569 CD33P20138 364 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms