RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 HMX1Q9NP08 348 aaPredicted RBP17.29■□□□□ 0.36
CCDC58-207ENST00000498466 RPTORQ8N122 1335 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 MYH2Q9UKX2 1941 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 ZBTB22O15209 634 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
CCDC58-207ENST00000498466 HMGCS2P54868 508 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 TIMM10P62072 90 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 ZNF280CQ8ND82 737 aa17.28■□□□□ 0.36
CCDC58-207ENST00000498466 OSBPL5Q9H0X9 879 aaPredicted RBP17.28■□□□□ 0.36
CCDC58-207ENST00000498466 PTPRFP10586 1907 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.36
CCDC58-207ENST00000498466 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 E9PSI1 815 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 SYN1P17600 705 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 RHBDL3P58872 404 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 MECOMQ03112 1051 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 TRIM32Q13049 653 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 GPR153Q6NV75 609 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 DEFB123Q8N688 67 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 SMC4Q9NTJ3 1288 aa17.27■□□□□ 0.36
CCDC58-207ENST00000498466 ASCC2Q9H1I8 757 aaPredicted RBP17.26■□□□□ 0.35
CCDC58-207ENST00000498466 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
CCDC58-207ENST00000498466 GJD2Q9UKL4 321 aa17.26■□□□□ 0.35
CCDC58-207ENST00000498466 A0A1B0GUL7 405 aa17.25■□□□□ 0.35
CCDC58-207ENST00000498466 USP17L5A8MUK1 530 aa17.25■□□□□ 0.35
CCDC58-207ENST00000498466 MAGEA10P43363 369 aaPredicted RBP17.25■□□□□ 0.35
CCDC58-207ENST00000498466 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
CCDC58-207ENST00000498466 ALDH1L2Q3SY69 923 aa17.25■□□□□ 0.35
CCDC58-207ENST00000498466 Q7L0L9 218 aa17.25■□□□□ 0.35
CCDC58-207ENST00000498466 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
CCDC58-207ENST00000498466 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
CCDC58-207ENST00000498466 ALPK3Q96L96 1907 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 CYP2B6P20813 491 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 KCNA4P22459 653 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 CAP2P40123 477 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 GSTO1P78417 241 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
CCDC58-207ENST00000498466 LRIT3Q3SXY7 679 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 TRIB2Q92519 343 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 AS3MTQ9HBK9 375 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 UNC80Q8N2C7 3258 aa17.24■□□□□ 0.35
CCDC58-207ENST00000498466 LDHCP07864 332 aa17.23■□□□□ 0.35
CCDC58-207ENST00000498466 IRX3P78415 501 aaPredicted RBP17.23■□□□□ 0.35
CCDC58-207ENST00000498466 SH3D19Q5HYK7 790 aa17.23■□□□□ 0.35
CCDC58-207ENST00000498466 ZNF384Q8TF68 577 aa17.23■□□□□ 0.35
CCDC58-207ENST00000498466 UBE2OQ9C0C9 1292 aaKnown RBP17.23■□□□□ 0.35
CCDC58-207ENST00000498466 OGDHLQ9ULD0 1010 aa17.23■□□□□ 0.35
CCDC58-207ENST00000498466 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
CCDC58-207ENST00000498466 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
CCDC58-207ENST00000498466 TFCP2Q12800 502 aa17.22■□□□□ 0.35
CCDC58-207ENST00000498466 RRP1BQ14684 758 aaKnown RBP17.22■□□□□ 0.35
CCDC58-207ENST00000498466 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
CCDC58-207ENST00000498466 NEUROD6Q96NK8 337 aa17.22■□□□□ 0.35
CCDC58-207ENST00000498466 RAI14Q9P0K7 980 aa17.22■□□□□ 0.35
CCDC58-207ENST00000498466 MORF4L1Q9UBU8 362 aa17.22■□□□□ 0.35
CCDC58-207ENST00000498466 STXBP5LQ9Y2K9 1186 aa17.22■□□□□ 0.35
CCDC58-207ENST00000498466 LOC285556D6RIA3 1793 aa17.22■□□□□ 0.35
CCDC58-207ENST00000498466 COL2A1P02458 1487 aaPredicted RBP17.21■□□□□ 0.35
CCDC58-207ENST00000498466 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 MTMR2Q13614 643 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 GORABQ5T7V8 394 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 TBC1D9Q6ZT07 1266 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 TEX11Q8IYF3 940 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 SPATA5Q8NB90 893 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 SOCS4Q8WXH5 440 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 NUDT12Q9BQG2 462 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 TMOD4Q9NZQ9 345 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 HERC5Q9UII4 1024 aaKnown RBP17.21■□□□□ 0.35
CCDC58-207ENST00000498466 NOB1Q9ULX3 412 aaKnown RBP17.21■□□□□ 0.35
CCDC58-207ENST00000498466 DOCK3Q8IZD9 2030 aa17.21■□□□□ 0.35
CCDC58-207ENST00000498466 DDX60LQ5H9U9 1706 aaKnown RBP17.21■□□□□ 0.35
CCDC58-207ENST00000498466 PFASO15067 1338 aa17.21■□□□□ 0.34
CCDC58-207ENST00000498466 PDE3AQ14432 1141 aa17.2■□□□□ 0.34
CCDC58-207ENST00000498466 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
CCDC58-207ENST00000498466 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
CCDC58-207ENST00000498466 GPRC5AQ8NFJ5 357 aa17.2■□□□□ 0.34
CCDC58-207ENST00000498466 MEIS3Q99687 375 aa17.2■□□□□ 0.34
CCDC58-207ENST00000498466 MTMR10Q9NXD2 777 aa17.2■□□□□ 0.34
CCDC58-207ENST00000498466 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
CCDC58-207ENST00000498466 PEX10O60683 326 aa17.19■□□□□ 0.34
CCDC58-207ENST00000498466 XRCC5P13010 732 aaKnown RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 BACE1P56817 501 aa17.19■□□□□ 0.34
CCDC58-207ENST00000498466 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 P2RX7Q99572 595 aaKnown RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 WDR18Q9BV38 432 aa17.19■□□□□ 0.34
CCDC58-207ENST00000498466 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 PI4KBQ9UBF8 816 aa17.19■□□□□ 0.34
CCDC58-207ENST00000498466 LAMA2P24043 3122 aaKnown RBP17.19■□□□□ 0.34
CCDC58-207ENST00000498466 ASNSP08243 561 aa17.18■□□□□ 0.34
CCDC58-207ENST00000498466 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
CCDC58-207ENST00000498466 HERVK_113P62684 666 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms