RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	DDTL	A6NHG4	134 aa	Predicted RBP	13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	ECE1	P42892	770 aa		13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	CTCF	P49711	727 aa	Predicted RBP	13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	MAP2K1	Q02750	393 aa	Predicted RBP	13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	PRKG1	Q13976	671 aa		13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	STK11IP	Q8N1F8	1099 aa		13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	PRDM10	Q9NQV6	1147 aa		13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	CTNNA3	Q9UI47	895 aa		13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	TLL2	Q9Y6L7	1015 aa		13.64	□□□□□ -0.23
CTTN-208	ENST00000498223		U3KPZ7	1027 aa	Predicted RBP	13.64	□□□□□ -0.23
CTTN-208	ENST00000498223	CYP2D7	A0A087X1C5	515 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	FGA	P02671	866 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	SLC3A2	P08195	630 aa	Known RBP	13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	CYP2D6	P10635	497 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	PTH1R	Q03431	593 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	DCAF15	Q66K64	600 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	CTR9	Q6PD62	1173 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	MIGA2	Q7L4E1	593 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	SH3BP5L	Q7L8J4	393 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	PI4KB	Q9UBF8	816 aa		13.63	□□□□□ -0.23
CTTN-208	ENST00000498223	COL2A1	P02458	1487 aa	Predicted RBP	13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	CELF2	O95319	508 aa	Known RBP	13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	HAND2	P61296	217 aa		13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	ALX1	Q15699	326 aa		13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	IMMT	Q16891	758 aa	Known RBP	13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	SAPCD2	Q86UD0	394 aa		13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	CDAN1	Q8IWY9	1227 aa		13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	CAPNS2	Q96L46	248 aa		13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	9e-10	■■□□□ 11.9
CTTN-208	ENST00000498223	TOMM22	Q9NS69	142 aa		13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	RBM8A	Q9Y5S9	174 aa	Known RBP	13.62	□□□□□ -0.23
CTTN-208	ENST00000498223	ATRNL1	Q5VV63	1379 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	FAM196B	A6NMK8	535 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	ZNF213	O14771	459 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	PPP1R12B	O60237	982 aa	Predicted RBP	13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	PLCD1	P51178	756 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	CTDSPL2	Q05D32	466 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	PPARA	Q07869	468 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	SBK1	Q52WX2	424 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	C12orf60	Q5U649	245 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	HHIPL1	Q96JK4	782 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	TEPSIN	Q96N21	525 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	LSG1	Q9H089	658 aa	Known RBP	13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	SERPINB13	Q9UIV8	391 aa		13.61	□□□□□ -0.23
CTTN-208	ENST00000498223	OTOF	Q9HC10	1997 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	FOXP2	O15409	715 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	DOCK1	Q14185	1865 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	C8orf34	Q49A92	452 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	CYP4F22	Q6NT55	531 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	ARMC9	Q7Z3E5	817 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	C2orf69	Q8N8R5	385 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	MAP4K1	Q92918	833 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	DYNLL2	Q96FJ2	89 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	ZNF341	Q9BYN7	854 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	MKNK2	Q9HBH9	465 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	ANGEL1	Q9UNK9	670 aa	Known RBP	13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	PAPPA2	Q9BXP8	1791 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	ZMYM6	O95789	1325 aa		13.6	□□□□□ -0.23
CTTN-208	ENST00000498223	MYH4	Q9Y623	1939 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	CAPN15	O75808	1086 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	MCC	P23508	829 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	MAP2K2	P36507	400 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	IREB2	P48200	963 aa	Known RBP	13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	EVX2	Q03828	476 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	PDE4B	Q07343	736 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	GRM1	Q13255	1194 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	RNF20	Q5VTR2	975 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	ZNF287	Q9HBT7	754 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	GBA2	Q9HCG7	927 aa	Predicted RBP	13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	HERC5	Q9UII4	1024 aa	Known RBP	13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	FZD1	Q9UP38	647 aa		13.59	□□□□□ -0.23
CTTN-208	ENST00000498223	THSD7B	Q9C0I4	1608 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	SMIM22	K7EJ46	135 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	SLURP2	P0DP57	97 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	HSPA8	P11142	646 aa	Known RBP	13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	CDK8	P49336	464 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	LBX1	P52954	281 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	RRP12	Q5JTH9	1297 aa	Known RBP	13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	SLC44A5	Q8NCS7	719 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	WRNIP1	Q96S55	665 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	BEGAIN	Q9BUH8	593 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	EHD4	Q9H223	541 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	RNF41	Q9H4P4	317 aa	Predicted RBP	13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	SWAP70	Q9UH65	585 aa		13.58	□□□□□ -0.24
CTTN-208	ENST00000498223	MPHOSPH10	O00566	681 aa	Known RBP	13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	TBC1D12	O60347	775 aa		13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	USP2	O75604	605 aa	Predicted RBP	13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	CERKL	Q49MI3	558 aa	Predicted RBP	13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	MFSD6	Q6ZSS7	791 aa		13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	C16orf86	Q6ZW13	317 aa		13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	MOB2	Q70IA6	237 aa		13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	USP26	Q9BXU7	913 aa		13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	UPF2	Q9HAU5	1272 aa	Known RBP	13.57	□□□□□ -0.24
CTTN-208	ENST00000498223	SSC5D	A1L4H1	1573 aa		13.57	□□□□□ -0.24

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