RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 MCM9Q9NXL9 1143 aa23.78■■□□□ 1.4
HLA-B-255ENST00000498007 PCNTO95613 3336 aa23.78■■□□□ 1.4
HLA-B-255ENST00000498007 DOCK1Q14185 1865 aa23.77■■□□□ 1.4
HLA-B-255ENST00000498007 UNCXA6NJT0 531 aa23.77■■□□□ 1.4
HLA-B-255ENST00000498007 POLR3DP05423 398 aaPredicted RBP23.77■■□□□ 1.4
HLA-B-255ENST00000498007 NOGQ13253 232 aa23.77■■□□□ 1.4
HLA-B-255ENST00000498007 DDRGK1Q96HY6 314 aa23.77■■□□□ 1.4
HLA-B-255ENST00000498007 FAM227BQ96M60 508 aa23.77■■□□□ 1.4
HLA-B-255ENST00000498007 ATP8A2Q9NTI2 1148 aa23.77■■□□□ 1.4
HLA-B-255ENST00000498007 ATAD5Q96QE3 1844 aa23.76■■□□□ 1.39
HLA-B-255ENST00000498007 A0A0D9SFI3 127 aa23.76■■□□□ 1.39
HLA-B-255ENST00000498007 NMIQ13287 307 aaPredicted RBP23.76■■□□□ 1.39
HLA-B-255ENST00000498007 CCDC129Q6ZRS4 1044 aa23.76■■□□□ 1.39
HLA-B-255ENST00000498007 HERC5Q9UII4 1024 aaKnown RBP23.76■■□□□ 1.39
HLA-B-255ENST00000498007 ZNF112Q9UJU3 913 aa23.76■■□□□ 1.39
HLA-B-255ENST00000498007 SNCAIPQ9Y6H5 919 aa23.76■■□□□ 1.39
HLA-B-255ENST00000498007 TBC1D12O60347 775 aa23.75■■□□□ 1.39
HLA-B-255ENST00000498007 SDSP20132 328 aa23.75■■□□□ 1.39
HLA-B-255ENST00000498007 TTC6Q86TZ1 520 aa23.75■■□□□ 1.39
HLA-B-255ENST00000498007 WNK4Q96J92 1243 aa23.75■■□□□ 1.39
HLA-B-255ENST00000498007 ZIC5Q96T25 663 aa23.75■■□□□ 1.39
HLA-B-255ENST00000498007 LAMB1P07942 1786 aa23.75■■□□□ 1.39
HLA-B-255ENST00000498007 PHF20L1A8MW92 1017 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 CYP2D6P10635 497 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 GNAT2P19087 354 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 MAP3K10Q02779 954 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 JMYQ8N9B5 988 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 CNKSR2Q8WXI2 1034 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 OPTNQ96CV9 577 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 DNAJC18Q9H819 358 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 HELLSQ9NRZ9 838 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 DIAPH3Q9NSV4 1193 aa23.74■■□□□ 1.39
HLA-B-255ENST00000498007 APPP05067 770 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 PLCD1P51178 756 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 KIF23Q02241 960 aaPredicted RBP23.73■■□□□ 1.39
HLA-B-255ENST00000498007 EVX2Q03828 476 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 SPRYD7Q5W111 196 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 TICAM2Q86XR7 235 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 AMOTL1Q8IY63 956 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 OTUD5Q96G74 571 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 SERPINB13Q9UIV8 391 aa23.73■■□□□ 1.39
HLA-B-255ENST00000498007 GSG1L2A8MUP6 293 aa23.72■■□□□ 1.39
HLA-B-255ENST00000498007 GJA5P36382 358 aa23.72■■□□□ 1.39
HLA-B-255ENST00000498007 MAP2K2P36507 400 aa23.72■■□□□ 1.39
HLA-B-255ENST00000498007 NOL9Q5SY16 702 aaKnown RBP23.72■■□□□ 1.39
HLA-B-255ENST00000498007 FOXP4Q8IVH2 680 aaPredicted RBP23.72■■□□□ 1.39
HLA-B-255ENST00000498007 EPB41L4AQ9HCS5 686 aaPredicted RBP23.72■■□□□ 1.39
HLA-B-255ENST00000498007 CYP2D7A0A087X1C5 515 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 SPDYE5A6NIY4 337 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 HIP1O00291 1037 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 ZBTB48P10074 688 aaPredicted RBP23.71■■□□□ 1.39
HLA-B-255ENST00000498007 TDO2P48775 406 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 MCMDC2Q4G0Z9 681 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 SCYL3Q8IZE3 742 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 EHD4Q9H223 541 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 PICK1Q9NRD5 415 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 MYH8P13535 1937 aa23.71■■□□□ 1.39
HLA-B-255ENST00000498007 USP17L12C9JPN9 530 aa23.7■■□□□ 1.38
HLA-B-255ENST00000498007 USP17L21D6R901 530 aa23.7■■□□□ 1.38
HLA-B-255ENST00000498007 CWC27Q6UX04 472 aaKnown RBP23.7■■□□□ 1.38
HLA-B-255ENST00000498007 METTL16Q86W50 562 aaKnown RBP23.7■■□□□ 1.38
HLA-B-255ENST00000498007 ERO1BQ86YB8 467 aa23.7■■□□□ 1.38
HLA-B-255ENST00000498007 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.7■■□□□ 1.38
HLA-B-255ENST00000498007 ARPP21Q9UBL0 812 aaPredicted RBP23.7■■□□□ 1.38
HLA-B-255ENST00000498007 PATL2C9JE40 543 aaKnown RBP23.69■■□□□ 1.38
HLA-B-255ENST00000498007 CTNND1O60716 968 aaKnown RBP23.69■■□□□ 1.38
HLA-B-255ENST00000498007 RRP1BQ14684 758 aaKnown RBP23.69■■□□□ 1.38
HLA-B-255ENST00000498007 CTR9Q6PD62 1173 aa23.69■■□□□ 1.38
HLA-B-255ENST00000498007 ZNF589Q86UQ0 364 aaPredicted RBP23.69■■□□□ 1.38
HLA-B-255ENST00000498007 NACAP1Q9BZK3 213 aa23.69■■□□□ 1.38
HLA-B-255ENST00000498007 CCDC171Q6TFL3 1326 aa23.68■■□□□ 1.38
HLA-B-255ENST00000498007 GDF11O95390 407 aa23.68■■□□□ 1.38
HLA-B-255ENST00000498007 VPS53Q5VIR6 699 aa23.68■■□□□ 1.38
HLA-B-255ENST00000498007 GIMAP6Q6P9H5 292 aa23.68■■□□□ 1.38
HLA-B-255ENST00000498007 IFNL3Q8IZI9 196 aa23.68■■□□□ 1.38
HLA-B-255ENST00000498007 DYNLL2Q96FJ2 89 aa23.68■■□□□ 1.38
HLA-B-255ENST00000498007 MINDY4BA8MYZ0 360 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 SMIM22K7EJ46 135 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 CAP2P40123 477 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 MAP2K1Q02750 393 aaPredicted RBP23.67■■□□□ 1.38
HLA-B-255ENST00000498007 C12orf60Q5U649 245 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 CCDC84Q86UT8 332 aaPredicted RBP23.67■■□□□ 1.38
HLA-B-255ENST00000498007 SLC44A5Q8NCS7 719 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 NAPBQ9H115 298 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 PHIPQ8WWQ0 1821 aa23.67■■□□□ 1.38
HLA-B-255ENST00000498007 PPATQ06203 517 aa23.66■■□□□ 1.38
HLA-B-255ENST00000498007 SREBF2Q12772 1141 aa23.66■■□□□ 1.38
HLA-B-255ENST00000498007 PPIL2Q13356 520 aa23.66■■□□□ 1.38
HLA-B-255ENST00000498007 SHROOM1Q2M3G4 852 aaPredicted RBP23.66■■□□□ 1.38
HLA-B-255ENST00000498007 MANSC4A6NHS7 340 aaPredicted RBP23.65■■□□□ 1.38
HLA-B-255ENST00000498007 IRF6O14896 467 aa23.65■■□□□ 1.38
HLA-B-255ENST00000498007 FOXP2O15409 715 aa23.65■■□□□ 1.38
HLA-B-255ENST00000498007 HSPA1AP0DMV8 641 aaKnown RBP23.65■■□□□ 1.38
HLA-B-255ENST00000498007 HSPA1BP0DMV9 641 aaKnown RBP23.65■■□□□ 1.38
HLA-B-255ENST00000498007 PTPRAP18433 802 aa23.65■■□□□ 1.38
HLA-B-255ENST00000498007 SHMT1P34896 483 aa23.65■■□□□ 1.38
HLA-B-255ENST00000498007 GABPAQ06546 454 aa23.65■■□□□ 1.38
HLA-B-255ENST00000498007 STK11IPQ8N1F8 1099 aa23.65■■□□□ 1.38
HLA-B-255ENST00000498007 MFAP1P55081 439 aaKnown RBP23.64■■□□□ 1.37
HLA-B-255ENST00000498007 SBK1Q52WX2 424 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms