RNA–Protein interactions for RNA: ENST00000497977.1

PTPRN-218, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-218ENST00000497977 KIF22Q14807 665 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 B4GALNT3Q6L9W6 998 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 CCDC136Q96JN2 1154 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 ZIC5Q96T25 663 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 EHD4Q9H223 541 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
PTPRN-218ENST00000497977 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 IRF6O14896 467 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 IGHDP01880 384 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 PTPRAP18433 802 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 INPP5BP32019 993 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 CAP2P40123 477 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 COL13A1Q5TAT6 717 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-218ENST00000497977 GIMAP6Q6P9H5 292 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 ADGRA1Q86SQ6 560 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 METTL16Q86W50 562 aaKnown RBP12.48□□□□□ -0.41
PTPRN-218ENST00000497977 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 RIOK1Q9BRS2 568 aaKnown RBP12.48□□□□□ -0.41
PTPRN-218ENST00000497977 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 SWAP70Q9UH65 585 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 SNCAIPQ9Y6H5 919 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-218ENST00000497977 PSME4Q14997 1843 aa12.48□□□□□ -0.41
PTPRN-218ENST00000497977 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 GPR25O00155 361 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 FKTNO75072 461 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 TBC1D8O95759 1140 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 APPP05067 770 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
PTPRN-218ENST00000497977 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
PTPRN-218ENST00000497977 NUCB1Q02818 461 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
PTPRN-218ENST00000497977 SH3BP5LQ7L8J4 393 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 ANKRD23Q86SG2 305 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 APPBP2Q92624 585 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 MS4A4AQ96JQ5 239 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 SLC4A4Q9Y6R1 1079 aa12.47□□□□□ -0.41
PTPRN-218ENST00000497977 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.41
PTPRN-218ENST00000497977 TCRBV5S4A2TA0A5A2 114 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 TRIM6-TRIM34B2RNG4 842 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 HIP1O00291 1037 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 PDE1AP54750 535 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 TAF1CQ15572 869 aaPredicted RBP12.46□□□□□ -0.41
PTPRN-218ENST00000497977 ZNF280CQ8ND82 737 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 ERO1AQ96HE7 468 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 CCDC17Q96LX7 622 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 SAP30BPQ9UHR5 308 aaKnown RBP12.46□□□□□ -0.41
PTPRN-218ENST00000497977 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 SLC45A1Q9Y2W3 748 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 AFG3L2Q9Y4W6 797 aa12.46□□□□□ -0.41
PTPRN-218ENST00000497977 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
PTPRN-218ENST00000497977 MBD4O95243 580 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 GNRH1P01148 92 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 OSBPP22059 807 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 HOXD10P28358 340 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 USP14P54578 494 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 SP3Q02447 781 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 EDC3Q96F86 508 aaKnown RBP12.45□□□□□ -0.42
PTPRN-218ENST00000497977 WDR18Q9BV38 432 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 ARMT1Q9H993 441 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
PTPRN-218ENST00000497977 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 MAST2Q6P0Q8 1798 aa12.45□□□□□ -0.42
PTPRN-218ENST00000497977 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 PDHXO00330 501 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 GJA5P36382 358 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 SPP2Q13103 211 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 ABCB5Q2M3G0 1257 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 CTU1Q7Z7A3 348 aaKnown RBP12.44□□□□□ -0.42
PTPRN-218ENST00000497977 PROCA1Q8NCQ7 364 aaPredicted RBP12.44□□□□□ -0.42
PTPRN-218ENST00000497977 PI4K2BQ8TCG2 481 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 RILPL2Q969X0 211 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 STRBPQ96SI9 672 aaKnown RBP12.44□□□□□ -0.42
PTPRN-218ENST00000497977 PARK7Q99497 189 aaKnown RBP12.44□□□□□ -0.42
PTPRN-218ENST00000497977 OSBPL3Q9H4L5 887 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 MKNK2Q9HBH9 465 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 HELLSQ9NRZ9 838 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 PPP4R2Q9NY27 417 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 ARPP21Q9UBL0 812 aaPredicted RBP12.44□□□□□ -0.42
PTPRN-218ENST00000497977 AK9Q5TCS8 1911 aa12.44□□□□□ -0.42
PTPRN-218ENST00000497977 A0A0G2JLL6 359 aaPredicted RBP12.43□□□□□ -0.42
PTPRN-218ENST00000497977 TRIM75PA6NK02 468 aa12.43□□□□□ -0.42
PTPRN-218ENST00000497977 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTPRN-218ENST00000497977 TLR2O60603 784 aa12.43□□□□□ -0.42
PTPRN-218ENST00000497977 DGKZQ13574 1117 aa12.43□□□□□ -0.42
PTPRN-218ENST00000497977 PPP4R3BQ5MIZ7 849 aa12.43□□□□□ -0.42
PTPRN-218ENST00000497977 GADL1Q6ZQY3 521 aa12.43□□□□□ -0.42
PTPRN-218ENST00000497977 PRRT2Q7Z6L0 340 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms