RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 COG1Q8WTW3 980 aa14.79□□□□□ -0.04
GAPVD1-220ENST00000497580 SELENOOQ9BVL4 669 aa14.79□□□□□ -0.04
GAPVD1-220ENST00000497580 ATP2C2O75185 946 aa14.79□□□□□ -0.04
GAPVD1-220ENST00000497580 MYBL2P10244 700 aa14.79□□□□□ -0.04
GAPVD1-220ENST00000497580 GNL3LQ9NVN8 582 aaKnown RBP14.79□□□□□ -0.04
GAPVD1-220ENST00000497580 PIK3C2BO00750 1634 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 PRC1O43663 620 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 POSTNQ15063 836 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 TTC39AQ5SRH9 613 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 SALL1Q9NSC2 1324 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 KIF1CO43896 1103 aaKnown RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 FXR1P51114 621 aaKnown RBP eCLIP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 EXOSC10Q01780 885 aaKnown RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 RALYLQ86SE5 291 aaKnown RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 KAZALD1Q96I82 304 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 CCDC85AQ96PX6 553 aaPredicted RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 SNRKQ9NRH2 765 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 LTKP29376 864 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 FILIP1LQ4L180 1135 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 TNNI3KQ59H18 835 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 ZNF274Q96GC6 653 aaPredicted RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 DBF4Q9UBU7 674 aaPredicted RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 FPGT-TNNI3KV9GXZ4 949 aa14.78□□□□□ -0.04
GAPVD1-220ENST00000497580 KSR2Q6VAB6 950 aa14.77□□□□□ -0.04
GAPVD1-220ENST00000497580 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.04
GAPVD1-220ENST00000497580 SCLT1Q96NL6 688 aa14.77□□□□□ -0.04
GAPVD1-220ENST00000497580 VPS16Q9H269 839 aa14.77□□□□□ -0.04
GAPVD1-220ENST00000497580 TTF2Q9UNY4 1162 aaKnown RBP14.77□□□□□ -0.04
GAPVD1-220ENST00000497580 SIGLEC1Q9BZZ2 1709 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 USP14P54578 494 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 PPFIA1Q13136 1202 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 EPHA10Q5JZY3 1008 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 MICU3Q86XE3 530 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 SH2D3CQ8N5H7 860 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 HSPD1P10809 573 aaKnown RBP14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 SATB1Q01826 763 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 GRIN1Q05586 938 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 C2orf54Q08AI8 447 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 TRIM29Q14134 588 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 DACH1Q9UI36 760 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 ODF2LQ9ULJ1 636 aa14.77□□□□□ -0.05
GAPVD1-220ENST00000497580 AGLP35573 1532 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 ATP5J2-PTCD1G3V325 749 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 PTCD1O75127 700 aaKnown RBP14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 PAX7P23759 505 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 ELF1P32519 619 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 E2F5Q15329 346 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 KRT40Q6A162 431 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 PANX2Q96RD6 677 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 EID1Q9Y6B2 187 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 TSPOAP1O95153 1857 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 MFAP3LO75121 409 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 HOXC9P31274 260 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 CDR1P51861 262 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 NEDD9Q14511 834 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 STAMQ92783 540 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 RRP36Q96EU6 259 aaKnown RBP14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 PSMB7Q99436 277 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 JADE2Q9NQC1 790 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 UBE2Q2LH0YL09 131 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 N4BP3O15049 544 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 ZNF185O15231 689 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 ATP1A1P05023 1023 aaKnown RBP14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 ATP5JP18859 108 aa14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
GAPVD1-220ENST00000497580 NR1I3Q14994 352 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 GPIHBP1Q8IV16 184 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 AIDAQ96BJ3 306 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 VEZTQ9HBM0 779 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 PXDNLA1KZ92 1463 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 FLT4P35916 1363 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 FKBP4Q02790 459 aaKnown RBP eCLIP14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 MYL10Q9BUA6 226 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 NBPF3Q9H094 633 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 TUBBP07437 444 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 ERVK-24P63145 666 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 RASGRP2Q7LDG7 609 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 MYD88Q99836 296 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 CARD10Q9BWT7 1032 aa14.75□□□□□ -0.05
GAPVD1-220ENST00000497580 MYO5BQ9ULV0 1848 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 RPSAP08865 295 aaKnown RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 ZNF18P17022 549 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 AARSP49588 968 aaKnown RBP eCLIP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 TIMM10P62072 90 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 SLC7A5Q01650 507 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 WDR93Q6P2C0 686 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 KIAA1328Q86T90 577 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 ENOX1Q8TC92 643 aaKnown RBP14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 WWC3Q9ULE0 1092 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 HPSEQ9Y251 543 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 AGPSO00116 658 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 GPTP24298 496 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 KRT9P35527 623 aa14.74□□□□□ -0.05
GAPVD1-220ENST00000497580 CEP85LQ5SZL2 805 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms