RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 SNCAIPQ9Y6H5 919 aa7.57□□□□□ -1.2
TRIM4-205ENST00000496896 LIG3P49916 1009 aa7.56□□□□□ -1.2
TRIM4-205ENST00000496896 MEI1Q5TIA1 1274 aa7.56□□□□□ -1.2
TRIM4-205ENST00000496896 CBLL1Q75N03 491 aa7.56□□□□□ -1.2
TRIM4-205ENST00000496896 CYFIP1Q7L576 1253 aa7.56□□□□□ -1.2
TRIM4-205ENST00000496896 HDXQ7Z353 690 aa7.56□□□□□ -1.2
TRIM4-205ENST00000496896 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRIM4-205ENST00000496896 PTPN11Q06124 597 aaPredicted RBP7.55□□□□□ -1.2
TRIM4-205ENST00000496896 CDK5R2Q13319 367 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 PPM1JQ5JR12 505 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 HOMEZQ8IX15 550 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 ELMO3Q96BJ8 720 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 DUSP23Q9BVJ7 150 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 MRS2Q9HD23 443 aa7.55□□□□□ -1.2
TRIM4-205ENST00000496896 SSU72Q9NP77 194 aaKnown RBP7.55□□□□□ -1.2
TRIM4-205ENST00000496896 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
TRIM4-205ENST00000496896 DCDC2CA8MYV0 355 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 FAM87AP0C7U9 286 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
TRIM4-205ENST00000496896 ITGB5P18084 799 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 LMNB1P20700 586 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 CAP2P40123 477 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 INPP5AQ14642 412 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 LRFN4Q6PJG9 635 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 CCDC84Q86UT8 332 aaPredicted RBP7.54□□□□□ -1.2
TRIM4-205ENST00000496896 VSIG10LQ86VR7 867 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 C12orf40Q86WS4 652 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 ZNF507Q8TCN5 953 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 KRTAP4-5Q9BYR2 181 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 LGR6Q9HBX8 967 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 PICK1Q9NRD5 415 aa7.54□□□□□ -1.2
TRIM4-205ENST00000496896 TAGLNQ01995 201 aaKnown RBP7.53□□□□□ -1.2
TRIM4-205ENST00000496896 FBLN7Q53RD9 439 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 ZNF326Q5BKZ1 582 aaKnown RBP7.53□□□□□ -1.2
TRIM4-205ENST00000496896 PLPPR2Q96GM1 343 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 FBXL18Q96ME1 805 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 FAM161BQ96MY7 647 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 BCL2L13Q9BXK5 485 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 MIR1-1HGQ9H1L0 117 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
TRIM4-205ENST00000496896 TMCO4Q5TGY1 634 aa7.52□□□□□ -1.21
TRIM4-205ENST00000496896 CDC37L1Q7L3B6 337 aa7.52□□□□□ -1.21
TRIM4-205ENST00000496896 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
TRIM4-205ENST00000496896 BCL11AQ9H165 835 aa7.52□□□□□ -1.21
TRIM4-205ENST00000496896 VTI1BQ9UEU0 232 aa7.52□□□□□ -1.21
TRIM4-205ENST00000496896 ZC3H7BQ9UGR2 993 aaKnown RBP7.52□□□□□ -1.21
TRIM4-205ENST00000496896 CSADQ9Y600 493 aa7.52□□□□□ -1.21
TRIM4-205ENST00000496896 GFRA2O00451 464 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 TFE3P19532 575 aaPredicted RBP7.51□□□□□ -1.21
TRIM4-205ENST00000496896 PWP1Q13610 501 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 TSNAXIP1Q2TAA8 658 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 WIPI1Q5MNZ9 446 aaPredicted RBP7.51□□□□□ -1.21
TRIM4-205ENST00000496896 DIEXFQ68CQ4 756 aaKnown RBP7.51□□□□□ -1.21
TRIM4-205ENST00000496896 TP53INP2Q8IXH6 220 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 PHC3Q8NDX5 983 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 MISP3Q96FF7 219 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 LRRC4CQ9HCJ2 640 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 PRDM10Q9NQV6 1147 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 PCDHB5Q9Y5E4 795 aa7.51□□□□□ -1.21
TRIM4-205ENST00000496896 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRIM4-205ENST00000496896 LRIG2O94898 1065 aa7.5□□□□□ -1.21
TRIM4-205ENST00000496896 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.5□□□□□ -1.21
TRIM4-205ENST00000496896 STK11IPQ8N1F8 1099 aa7.5□□□□□ -1.21
TRIM4-205ENST00000496896 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
TRIM4-205ENST00000496896 PRAMEF27A3QJZ7 478 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 LEFTY1O75610 366 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 SEPT6Q14141 434 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 MRPL58Q14197 206 aaKnown RBP7.49□□□□□ -1.21
TRIM4-205ENST00000496896 MAP3K11Q16584 847 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 FAM214BQ7L5A3 538 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 TOP6BLQ8N6T0 577 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 NETO1Q8TDF5 533 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 GIPC2Q8TF65 315 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
TRIM4-205ENST00000496896 OXCT1P55809 520 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 RPL6Q02878 288 aaKnown RBP7.48□□□□□ -1.21
TRIM4-205ENST00000496896 LMNB2Q03252 620 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 SLBPQ14493 270 aaKnown RBP eCLIP7.48□□□□□ -1.21
TRIM4-205ENST00000496896 SPOCD1Q6ZMY3 1216 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 ARMCX6Q7L4S7 300 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 UBE3DQ7Z6J8 389 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 HID1Q8IV36 788 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 MFSD2AQ8NA29 543 aa7.48□□□□□ -1.21
TRIM4-205ENST00000496896 DBX1A6NMT0 343 aa7.47□□□□□ -1.21
TRIM4-205ENST00000496896 ETF1P62495 437 aaKnown RBP7.47□□□□□ -1.21
TRIM4-205ENST00000496896 IFI16Q16666 785 aaKnown RBP7.47□□□□□ -1.21
TRIM4-205ENST00000496896 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
TRIM4-205ENST00000496896 RHOVQ96L33 236 aa7.47□□□□□ -1.21
TRIM4-205ENST00000496896 TMEM74Q96NL1 305 aa7.47□□□□□ -1.21
TRIM4-205ENST00000496896 FOXQ1Q9C009 403 aa7.47□□□□□ -1.21
TRIM4-205ENST00000496896 TLR6Q9Y2C9 796 aa7.47□□□□□ -1.21
TRIM4-205ENST00000496896 CILPO75339 1184 aa7.46□□□□□ -1.22
TRIM4-205ENST00000496896 CEACAM5P06731 702 aa7.46□□□□□ -1.22
TRIM4-205ENST00000496896 CDK8P49336 464 aa7.46□□□□□ -1.22
TRIM4-205ENST00000496896 PDE4BQ07343 736 aa7.46□□□□□ -1.22
TRIM4-205ENST00000496896 ZNF648Q5T619 568 aaPredicted RBP7.46□□□□□ -1.22
TRIM4-205ENST00000496896 RELL1Q8IUW5 271 aa7.46□□□□□ -1.22
TRIM4-205ENST00000496896 BCL7CQ8WUZ0 217 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 359.4 ms