RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 SCYL3Q8IZE3 742 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 LCORLQ8N3X6 602 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 OTUD5Q96G74 571 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 OSBPL3Q9H4L5 887 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 ARMT1Q9H993 441 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 PICK1Q9NRD5 415 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 ATP8A2Q9NTI2 1148 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 PALD1Q9ULE6 856 aa23.17■■□□□ 1.3
CTDSP1-213ENST00000496785 PHF20L1A8MW92 1017 aa23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 FOXN1O15353 648 aa23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 ALDH1A1P00352 501 aa23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 GTF2A2P52657 109 aa23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 OTUD7BQ6GQQ9 843 aa23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 AMOTL1Q8IY63 956 aa23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 SAP30BPQ9UHR5 308 aaKnown RBP23.16■■□□□ 1.3
CTDSP1-213ENST00000496785 PPIL2Q13356 520 aa23.15■■□□□ 1.3
CTDSP1-213ENST00000496785 EHD4Q9H223 541 aa23.15■■□□□ 1.3
CTDSP1-213ENST00000496785 TAOK2Q9UL54 1235 aa23.15■■□□□ 1.3
CTDSP1-213ENST00000496785 POLR3DP05423 398 aaPredicted RBP23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 GNAT2P19087 354 aa23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 METTL16Q86W50 562 aaKnown RBP23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 PLEKHM2Q8IWE5 1019 aa23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 PUS7LQ9H0K6 701 aaKnown RBP23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 MCM9Q9NXL9 1143 aa23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 LAMB1P07942 1786 aa23.14■■□□□ 1.29
CTDSP1-213ENST00000496785 GJA5P36382 358 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 SNAPC2Q13487 334 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 TBC1D2Q9BYX2 928 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 DCP1AQ9NPI6 582 aaPredicted RBP23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 GINM1Q9NU53 330 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 SERPINB13Q9UIV8 391 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 SLC4A4Q9Y6R1 1079 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 MYH1P12882 1939 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 NAV1Q8NEY1 1877 aa23.13■■□□□ 1.29
CTDSP1-213ENST00000496785 TRIM6-TRIM34B2RNG4 842 aa23.12■■□□□ 1.29
CTDSP1-213ENST00000496785 SLFNL1Q499Z3 407 aa23.12■■□□□ 1.29
CTDSP1-213ENST00000496785 SDR42E1Q8WUS8 393 aa23.12■■□□□ 1.29
CTDSP1-213ENST00000496785 TESPA1A2RU30 521 aaPredicted RBP23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 FAM196BA6NMK8 535 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 HSPA8P11142 646 aaKnown RBP23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 CETPP11597 493 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 CAP2P40123 477 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 CNKSR2Q8WXI2 1034 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 OSBP2Q969R2 916 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 PRDM10Q9NQV6 1147 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 RNF186Q9NXI6 227 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 DOCK1Q14185 1865 aa23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 DDX60LQ5H9U9 1706 aaKnown RBP23.11■■□□□ 1.29
CTDSP1-213ENST00000496785 IRF6O14896 467 aa23.1■■□□□ 1.29
CTDSP1-213ENST00000496785 TRPA1O75762 1119 aa23.1■■□□□ 1.29
CTDSP1-213ENST00000496785 PTPRAP18433 802 aa23.1■■□□□ 1.29
CTDSP1-213ENST00000496785 GIMAP6Q6P9H5 292 aa23.1■■□□□ 1.29
CTDSP1-213ENST00000496785 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
CTDSP1-213ENST00000496785 STRBPQ96SI9 672 aaKnown RBP23.1■■□□□ 1.29
CTDSP1-213ENST00000496785 CCL15-CCL14A0A0B4J2E2 113 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 CXCL11O14625 94 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 GPAA1O43292 621 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 CHGBP05060 677 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 ASNSP08243 561 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 CCL15Q16663 113 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 ZMYM1Q5SVZ6 1142 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 CENPQQ7L2Z9 268 aaPredicted RBP23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 RILPL2Q969X0 211 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 MS4A4AQ96JQ5 239 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 ARPP21Q9UBL0 812 aaPredicted RBP23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 KCNH4Q9UQ05 1017 aa23.09■■□□□ 1.29
CTDSP1-213ENST00000496785 SIPA1L1O43166 1804 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 PRKAB2O43741 272 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 LBX1P52954 281 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 SLC4A8Q2Y0W8 1093 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 CFHR5Q9BXR6 569 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 DNAJC18Q9H819 358 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 AS3MTQ9HBK9 375 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 ZCCHC17Q9NP64 241 aaKnown RBP23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 ZHX2Q9Y6X8 837 aa23.08■■□□□ 1.29
CTDSP1-213ENST00000496785 SLURP2P0DP57 97 aa23.07■■□□□ 1.28
CTDSP1-213ENST00000496785 NACAP1Q9BZK3 213 aa23.07■■□□□ 1.28
CTDSP1-213ENST00000496785 SWAP70Q9UH65 585 aa23.07■■□□□ 1.28
CTDSP1-213ENST00000496785 HIP1O00291 1037 aa23.06■■□□□ 1.28
CTDSP1-213ENST00000496785 PLCD1P51178 756 aa23.06■■□□□ 1.28
CTDSP1-213ENST00000496785 TATDN1Q6P1N9 297 aa23.06■■□□□ 1.28
CTDSP1-213ENST00000496785 BRI3BPQ8WY22 251 aa23.06■■□□□ 1.28
CTDSP1-213ENST00000496785 HELLSQ9NRZ9 838 aa23.06■■□□□ 1.28
CTDSP1-213ENST00000496785 USP17L5A8MUK1 530 aa23.05■■□□□ 1.28
CTDSP1-213ENST00000496785 M0R2C6 588 aa23.05■■□□□ 1.28
CTDSP1-213ENST00000496785 IGF2BP3O00425 579 aaKnown RBP eCLIP23.05■■□□□ 1.28
CTDSP1-213ENST00000496785 TSKSQ9UJT2 592 aa23.05■■□□□ 1.28
CTDSP1-213ENST00000496785 USP17L12C9JPN9 530 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 USP17L21D6R901 530 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 APPP05067 770 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 TDO2P48775 406 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 GABPAQ06546 454 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 NOM1Q5C9Z4 860 aaKnown RBP23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 C12orf60Q5U649 245 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 FASTKD5Q7L8L6 764 aaKnown RBP23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 CABP5Q9NP86 173 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 AFG3L2Q9Y4W6 797 aa23.04■■□□□ 1.28
CTDSP1-213ENST00000496785 PCNTO95613 3336 aa23.03■■□□□ 1.28
CTDSP1-213ENST00000496785 GSG1L2A8MUP6 293 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms