RNA–Protein interactions for RNA: ENST00000496309.3

RN7SL564P-201, Transcript of RNA, 7SL, cytoplasmic 564, pseudogene, humanhuman

BASIC

Gene RN7SL564P, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL564P-201ENST00000496309 SEC62Q99442 399 aaKnown RBP16.76■□□□□ 0.27
RN7SL564P-201ENST00000496309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.76■□□□□ 0.27
RN7SL564P-201ENST00000496309 PI4KBQ9UBF8 816 aa16.76■□□□□ 0.27
RN7SL564P-201ENST00000496309 TBC1D12O60347 775 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 HLA-DOAP06340 250 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 HSPA1AP0DMV8 641 aaKnown RBP16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 HSPA1BP0DMV9 641 aaKnown RBP16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 OTUD5Q96G74 571 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 CCDC136Q96JN2 1154 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 STRBPQ96SI9 672 aaKnown RBP16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 DCP1AQ9NPI6 582 aaPredicted RBP16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
RN7SL564P-201ENST00000496309 GPAA1O43292 621 aa16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 ZBTB48P10074 688 aaPredicted RBP16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 MAP2K1Q02750 393 aaPredicted RBP16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 EVX2Q03828 476 aa16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 CRACR2BQ8N4Y2 399 aaPredicted RBP16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 WBP1LQ9NX94 342 aa16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 HERC5Q9UII4 1024 aaKnown RBP16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 ATAD5Q96QE3 1844 aa16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
RN7SL564P-201ENST00000496309 SPDYE5A6NIY4 337 aa16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 PLCD1P51178 756 aa16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 NOL9Q5SY16 702 aaKnown RBP16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 ERO1BQ86YB8 467 aa16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 SCYL3Q8IZE3 742 aa16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 ATP8A2Q9NTI2 1148 aa16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.73■□□□□ 0.27
RN7SL564P-201ENST00000496309 CYP2D6P10635 497 aa16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 GSPT1P15170 499 aaKnown RBP16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 TTC22Q5TAA0 569 aa16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 METTL16Q86W50 562 aaKnown RBP16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 FAM227BQ96M60 508 aa16.72■□□□□ 0.27
RN7SL564P-201ENST00000496309 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 CCDC129Q6ZRS4 1044 aa16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 DDRGK1Q96HY6 314 aa16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 EHD4Q9H223 541 aa16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 SERPINB13Q9UIV8 391 aa16.71■□□□□ 0.27
RN7SL564P-201ENST00000496309 PHIPQ8WWQ0 1821 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 MANSC4A6NHS7 340 aaPredicted RBP16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 GSG1L2A8MUP6 293 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 FOXN1O15353 648 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 PPATQ06203 517 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 PPIL2Q13356 520 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 BEGAINQ9BUH8 593 aa16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 EPB41L4AQ9HCS5 686 aaPredicted RBP16.7■□□□□ 0.26
RN7SL564P-201ENST00000496309 USP17L12C9JPN9 530 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 USP17L21D6R901 530 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 IRF6O14896 467 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 GDF11O95390 407 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 PTPRAP18433 802 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 GNAT2P19087 354 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 SDSP20132 328 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 CAP2P40123 477 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 TM4SF4P48230 202 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 TSKSQ9UJT2 592 aa16.69■□□□□ 0.26
RN7SL564P-201ENST00000496309 APPP05067 770 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 SHMT1P34896 483 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 JAG1P78504 1218 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 GABPAQ06546 454 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 C12orf60Q5U649 245 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 CTR9Q6PD62 1173 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 TICAM2Q86XR7 235 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 AMOTL1Q8IY63 956 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 ARPP21Q9UBL0 812 aaPredicted RBP16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 ZHX2Q9Y6X8 837 aa16.68■□□□□ 0.26
RN7SL564P-201ENST00000496309 CCL15-CCL14A0A0B4J2E2 113 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 PATL2C9JE40 543 aaKnown RBP16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 IGF2BP3O00425 579 aaKnown RBP eCLIP16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 TRPA1O75762 1119 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 TDO2P48775 406 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 GTF2A2P52657 109 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 CCL15Q16663 113 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 MCMDC2Q4G0Z9 681 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 TATDN1Q6P1N9 297 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 GIMAP6Q6P9H5 292 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 IFNL3Q8IZI9 196 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
RN7SL564P-201ENST00000496309 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms