RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ACTR10Q9NZ32 417 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 NOP53Q9NZM5 478 aaKnown RBP8.15□□□□□ -1.1
SSR3-208ENST00000496050 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 ADAM30Q9UKF2 790 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
SSR3-208ENST00000496050 PCDHGC5Q9Y5F6 944 aa8.15□□□□□ -1.1
SSR3-208ENST00000496050 CADPSQ9ULU8 1353 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 GRK4P32298 578 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 SERINC3Q13530 473 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 BMS1Q14692 1282 aaKnown RBP8.14□□□□□ -1.11
SSR3-208ENST00000496050 PPM1JQ5JR12 505 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 INTS3Q68E01 1043 aaKnown RBP8.14□□□□□ -1.11
SSR3-208ENST00000496050 KIAA1211Q6ZU35 1233 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 ACAD11Q709F0 780 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 LSRQ86X29 649 aaPredicted RBP8.14□□□□□ -1.11
SSR3-208ENST00000496050 TMEM130Q8N3G9 435 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 C12orf50Q8NA57 414 aaPredicted RBP8.14□□□□□ -1.11
SSR3-208ENST00000496050 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 SMG8Q8ND04 991 aaKnown RBP8.14□□□□□ -1.11
SSR3-208ENST00000496050 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 TMEM40Q8WWA1 233 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 ATXN3LQ9H3M9 355 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 CRIM1Q9NZV1 1036 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 GMIPQ9P107 970 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 PPP1R9AQ9ULJ8 1098 aa8.14□□□□□ -1.11
SSR3-208ENST00000496050 TLDC2A0PJX2 215 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 SLC22A31A6NKX4 558 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 MEIS3P2A8K0S8 358 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 SOX4Q06945 474 aaPredicted RBP8.13□□□□□ -1.11
SSR3-208ENST00000496050 FXNQ16595 210 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 PODNQ7Z5L7 613 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 FAM177A1Q8N128 213 aaPredicted RBP8.13□□□□□ -1.11
SSR3-208ENST00000496050 C19orf47Q8N9M1 422 aaKnown RBP8.13□□□□□ -1.11
SSR3-208ENST00000496050 RNF214Q8ND24 703 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 SRPK1Q96SB4 655 aaKnown RBP8.13□□□□□ -1.11
SSR3-208ENST00000496050 PIF1Q9H611 641 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 ANTXR1Q9H6X2 564 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 TMA7Q9Y2S6 64 aaKnown RBP8.13□□□□□ -1.11
SSR3-208ENST00000496050 SLC12A7Q9Y666 1083 aa8.13□□□□□ -1.11
SSR3-208ENST00000496050 TMPRSS2O15393 492 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 WISP1O95388 367 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 ZBTB37Q5TC79 503 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 HID1Q8IV36 788 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 KCT2Q8NC54 265 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 ATG4CQ96DT6 458 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 DISC1Q9NRI5 854 aa8.12□□□□□ -1.11
SSR3-208ENST00000496050 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 CDCP2Q5VXM1 449 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 FDX2Q6P4F2 183 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 RUFY4Q6ZNE9 571 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 DYMQ7RTS9 669 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 MCATQ8IVS2 390 aaKnown RBP8.11□□□□□ -1.11
SSR3-208ENST00000496050 TAB3Q8N5C8 712 aaPredicted RBP8.11□□□□□ -1.11
SSR3-208ENST00000496050 FANCD2OSQ96PS1 177 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 CCDC113Q9H0I3 377 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 TNKS2Q9H2K2 1166 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 CNNM2Q9H8M5 875 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 AP4E1Q9UPM8 1137 aa8.11□□□□□ -1.11
SSR3-208ENST00000496050 A0A1W2PQH9 124 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 NME1P15531 152 aaKnown RBP8.1□□□□□ -1.11
SSR3-208ENST00000496050 ASPAP45381 313 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 YARSP54577 528 aaKnown RBP8.1□□□□□ -1.11
SSR3-208ENST00000496050 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
SSR3-208ENST00000496050 SLC6A19Q695T7 634 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 ANKRD34AQ69YU3 496 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 ZNF746Q6NUN9 644 aaPredicted RBP8.1□□□□□ -1.11
SSR3-208ENST00000496050 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
SSR3-208ENST00000496050 TTC6Q86TZ1 520 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 ST7Q9NRC1 585 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 KLHL3Q9UH77 587 aa8.1□□□□□ -1.11
SSR3-208ENST00000496050 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 WIPF1O43516 503 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 RNGTTO60942 597 aaKnown RBP8.09□□□□□ -1.11
SSR3-208ENST00000496050 ADH5P11766 374 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 DRD2P14416 443 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 DDR2Q16832 855 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 ARSHQ5FYA8 562 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 LARP1BQ659C4 914 aaKnown RBP8.09□□□□□ -1.11
SSR3-208ENST00000496050 NLRC3Q7RTR2 1065 aa8.09□□□□□ -1.11
SSR3-208ENST00000496050 ACSF2Q96CM8 615 aaPredicted RBP8.09□□□□□ -1.11
SSR3-208ENST00000496050 SSU72Q9NP77 194 aaKnown RBP8.09□□□□□ -1.11
SSR3-208ENST00000496050 F8W735 103 aaPredicted RBP8.08□□□□□ -1.12
SSR3-208ENST00000496050 DDAH1O94760 285 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 RAG1P15918 1043 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 TTLL4Q14679 1199 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 GRIK4Q16099 956 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 OVOS1Q6IE37 1185 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 CELF2-AS1Q8N7Q2 184 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 FAM13CQ8NE31 585 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
SSR3-208ENST00000496050 TMEM87BQ96K49 555 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 TJP2Q9UDY2 1190 aa8.08□□□□□ -1.12
SSR3-208ENST00000496050 CNTNAP5Q8WYK1 1306 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 CCDC85CA6NKD9 419 aa8.07□□□□□ -1.12
SSR3-208ENST00000496050 UPK3BL1B0FP48 263 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms