RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 LBHD1Q9BQE6 289 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOA-206ENST00000495532 ASCC2Q9H1I8 757 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOA-206ENST00000495532 TTYH1Q9H313 450 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOA-206ENST00000495532 MORF4L1Q9UBU8 362 aa14.19□□□□□ -0.14
HLA-DOA-206ENST00000495532 RAPGEFL1Q9UHV5 662 aa14.19□□□□□ -0.14
HLA-DOA-206ENST00000495532 UTYO14607 1347 aa14.18□□□□□ -0.14
HLA-DOA-206ENST00000495532 RLFQ13129 1914 aa14.18□□□□□ -0.14
HLA-DOA-206ENST00000495532 CCND3P30281 292 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOA-206ENST00000495532 ZEB1P37275 1124 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOA-206ENST00000495532 DDX4Q9NQI0 724 aaKnown RBP14.18□□□□□ -0.14
HLA-DOA-206ENST00000495532 GAKO14976 1311 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 SALL1Q9NSC2 1324 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 LDHBP07195 334 aaKnown RBP14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 HMGCS2P54868 508 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 SPP2Q13103 211 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 ZSCAN29Q8IWY8 852 aaPredicted RBP14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 SOCS4Q8WXH5 440 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 NUDT12Q9BQG2 462 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 SRCIN1Q9C0H9 1055 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 NCOR1O75376 2440 aa14.17□□□□□ -0.14
HLA-DOA-206ENST00000495532 PEX10O60683 326 aa14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 ZKSCAN1P17029 563 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 DDX10Q13206 875 aaKnown RBP14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 SHHQ15465 462 aa14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 C9orf50Q5SZB4 431 aa14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 ZNF280CQ8ND82 737 aa14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 USP6NLQ92738 828 aa14.16□□□□□ -0.14
HLA-DOA-206ENST00000495532 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 TNFRSF10AO00220 468 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 TBC1D12O60347 775 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 SLC5A1P13866 664 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 FOSL2P15408 326 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 EXOSC9Q06265 439 aaKnown RBP14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 CCL14Q16627 93 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 SH3D19Q5HYK7 790 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 SLC4A10Q6U841 1118 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 TRMT44Q8IYL2 757 aaKnown RBP14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 LPIN2Q92539 896 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 SENP6Q9GZR1 1112 aaPredicted RBP14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 PRKRIP1Q9H875 184 aaPredicted RBP14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 TXNRD2Q9NNW7 524 aa14.15□□□□□ -0.14
HLA-DOA-206ENST00000495532 SMAD3P84022 425 aaKnown RBP14.14□□□□□ -0.15
HLA-DOA-206ENST00000495532 PICALMQ13492 652 aa14.14□□□□□ -0.15
HLA-DOA-206ENST00000495532 TJAP1Q5JTD0 557 aa14.14□□□□□ -0.15
HLA-DOA-206ENST00000495532 OSBPL5Q9H0X9 879 aaPredicted RBP14.14□□□□□ -0.15
HLA-DOA-206ENST00000495532 SIPA1L1O43166 1804 aa14.13□□□□□ -0.15
HLA-DOA-206ENST00000495532 PLA2G5P39877 138 aa14.13□□□□□ -0.15
HLA-DOA-206ENST00000495532 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
HLA-DOA-206ENST00000495532 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
HLA-DOA-206ENST00000495532 USP38Q8NB14 1042 aa14.13□□□□□ -0.15
HLA-DOA-206ENST00000495532 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
HLA-DOA-206ENST00000495532 EYA2O00167 538 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 RGS2P41220 211 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 RTP1P59025 263 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 PDE3AQ14432 1141 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 MORN1Q5T089 497 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 GPRC5AQ8NFJ5 357 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 P2RX7Q99572 595 aaKnown RBP14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 APBA2Q99767 749 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 PORCNQ9H237 461 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 PRKAG2Q9UGJ0 569 aa14.12□□□□□ -0.15
HLA-DOA-206ENST00000495532 MAPK4P31152 587 aa14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 CAP2P40123 477 aa14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 BTDP43251 543 aa14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 RFX5P48382 616 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 HERVK_113P62684 666 aa14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 IRX3P78415 501 aaPredicted RBP14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 GPR142Q7Z601 462 aa14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 RBPJLQ9UBG7 517 aa14.11□□□□□ -0.15
HLA-DOA-206ENST00000495532 TMEM265A0A087WTH1 108 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 USP17L5A8MUK1 530 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 DNM1LO00429 736 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 SEMA3EO15041 775 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 PHKA1P46020 1223 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 RHBDL3P58872 404 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 MTMR2Q13614 643 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 Q3C1V9 767 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 ATG9AQ7Z3C6 839 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 FAM163AQ96GL9 167 aaPredicted RBP14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 GNL3LQ9NVN8 582 aaKnown RBP14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 DENND2AQ9ULE3 1009 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 BDP1A6H8Y1 2624 aa14.1□□□□□ -0.15
HLA-DOA-206ENST00000495532 ZBTB22O15209 634 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 ERVK-9P63128 1117 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 ERVK-24P63145 666 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 LPAR1Q92633 364 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 BADQ92934 168 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 AS3MTQ9HBK9 375 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 FLRT1Q9NZU1 646 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 ATP11BQ9Y2G3 1177 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 MROH7-TTC4A0A0A0MT08 1334 aa14.09□□□□□ -0.15
HLA-DOA-206ENST00000495532 BACE1P56817 501 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms