RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 DHX32Q7L7V1 743 aaKnown RBP18.56■□□□□ 0.56
PHF1-211ENST00000495509 RALYLQ86SE5 291 aaKnown RBP18.56■□□□□ 0.56
PHF1-211ENST00000495509 AMOTL1Q8IY63 956 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 ZSWIM5Q9P217 1185 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 CNTNAP1P78357 1384 aa18.56■□□□□ 0.56
PHF1-211ENST00000495509 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 ST18O60284 1047 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 KDM4AO75164 1064 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 NPM3O75607 178 aaKnown RBP18.55■□□□□ 0.56
PHF1-211ENST00000495509 AK2P54819 239 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 SNX21Q969T3 373 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 RNF41Q9H4P4 317 aaPredicted RBP18.55■□□□□ 0.56
PHF1-211ENST00000495509 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.55■□□□□ 0.56
PHF1-211ENST00000495509 ENTPD3O75355 529 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
PHF1-211ENST00000495509 TTC6Q86TZ1 520 aa18.55■□□□□ 0.56
PHF1-211ENST00000495509 ZSCAN29Q8IWY8 852 aaPredicted RBP18.55■□□□□ 0.56
PHF1-211ENST00000495509 GPHNQ9NQX3 736 aaPredicted RBP18.55■□□□□ 0.56
PHF1-211ENST00000495509 POLR2AP24928 1970 aaKnown RBP18.54■□□□□ 0.56
PHF1-211ENST00000495509 SLC3A2P08195 630 aaKnown RBP18.54■□□□□ 0.56
PHF1-211ENST00000495509 LMOD1P29536 600 aaPredicted RBP18.54■□□□□ 0.56
PHF1-211ENST00000495509 CDAN1Q8IWY9 1227 aa18.54■□□□□ 0.56
PHF1-211ENST00000495509 TMEM39BQ9GZU3 492 aa18.54■□□□□ 0.56
PHF1-211ENST00000495509 CNNM2Q9H8M5 875 aa18.54■□□□□ 0.56
PHF1-211ENST00000495509 HACL1Q9UJ83 578 aa18.54■□□□□ 0.56
PHF1-211ENST00000495509 PRC1O43663 620 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 MCM5P33992 734 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 CDK8P49336 464 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 TOB2Q14106 344 aaPredicted RBP18.53■□□□□ 0.56
PHF1-211ENST00000495509 FKBP1CQ5VVH2 108 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 Q6ZUG5 572 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 C16orf86Q6ZW13 317 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 FAM151AQ8WW52 585 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 L3MBTL3Q96JM7 780 aaPredicted RBP18.53■□□□□ 0.56
PHF1-211ENST00000495509 KRT23Q9C075 422 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 ZC3H4Q9UPT8 1303 aaKnown RBP18.53■□□□□ 0.56
PHF1-211ENST00000495509 ROBO3Q96MS0 1386 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 ORC4O43929 436 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 RANBP6O60518 1105 aaKnown RBP18.53■□□□□ 0.56
PHF1-211ENST00000495509 GABPAQ06546 454 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 PDE4BQ07343 736 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 FAM47AQ5JRC9 791 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 IPO9Q96P70 1041 aaKnown RBP18.53■□□□□ 0.56
PHF1-211ENST00000495509 ZKSCAN3Q9BRR0 538 aa18.53■□□□□ 0.56
PHF1-211ENST00000495509 DHX36Q9H2U1 1008 aaKnown RBP18.53■□□□□ 0.56
PHF1-211ENST00000495509 SIPA1L1O43166 1804 aa18.52■□□□□ 0.56
PHF1-211ENST00000495509 FAM196BA6NMK8 535 aa18.52■□□□□ 0.55
PHF1-211ENST00000495509 ANGEL2Q5VTE6 544 aaKnown RBP18.52■□□□□ 0.55
PHF1-211ENST00000495509 MKNK2Q9HBH9 465 aa18.52■□□□□ 0.55
PHF1-211ENST00000495509 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.55
PHF1-211ENST00000495509 POTECB2RU33 542 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 RASA3Q14644 834 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 FAM83AQ86UY5 434 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 HSCBQ8IWL3 235 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 ESR2Q92731 530 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
PHF1-211ENST00000495509 PI4KBQ9UBF8 816 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 PGAP2Q9UHJ9 254 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 SERPINB13Q9UIV8 391 aa18.51■□□□□ 0.55
PHF1-211ENST00000495509 PCP11498 1178 aaKnown RBP18.5■□□□□ 0.55
PHF1-211ENST00000495509 RASA1P20936 1047 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 DNAJC18Q9H819 358 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 SENP2Q9HC62 589 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 ATRNL1Q5VV63 1379 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
PHF1-211ENST00000495509 FGD1P98174 961 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 BECN1Q14457 450 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 IGDCC4Q8TDY8 1250 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 BRF1Q92994 677 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 CSRNP1Q96S65 589 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 TPCN1Q9ULQ1 816 aa18.5■□□□□ 0.55
PHF1-211ENST00000495509 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
PHF1-211ENST00000495509 NMT2O60551 498 aa18.49■□□□□ 0.55
PHF1-211ENST00000495509 LARGE1O95461 756 aa18.49■□□□□ 0.55
PHF1-211ENST00000495509 SHMT1P34896 483 aa18.49■□□□□ 0.55
PHF1-211ENST00000495509 ZNF444Q8N0Y2 327 aaPredicted RBP18.49■□□□□ 0.55
PHF1-211ENST00000495509 AGXT2Q9BYV1 514 aa18.49■□□□□ 0.55
PHF1-211ENST00000495509 EHD4Q9H223 541 aa18.49■□□□□ 0.55
PHF1-211ENST00000495509 EPHX2P34913 555 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 TFAP4Q01664 338 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 APOBRQ0VD83 1088 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 FOXP4Q8IVH2 680 aaPredicted RBP18.48■□□□□ 0.55
PHF1-211ENST00000495509 CRACR2BQ8N4Y2 399 aaPredicted RBP18.48■□□□□ 0.55
PHF1-211ENST00000495509 SPRYD3Q8NCJ5 442 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 TMX3Q96JJ7 454 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 DEFB129Q9H1M3 183 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 LIMCH1Q9UPQ0 1083 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 WDR19Q8NEZ3 1342 aa18.48■□□□□ 0.55
PHF1-211ENST00000495509 TSPY2A6NKD2 308 aa18.47■□□□□ 0.55
PHF1-211ENST00000495509 IFIT3O14879 490 aaKnown RBP18.47■□□□□ 0.55
PHF1-211ENST00000495509 TNNI2P48788 182 aa18.47■□□□□ 0.55
PHF1-211ENST00000495509 PRAMEF18Q5VWM3 479 aa18.47■□□□□ 0.55
PHF1-211ENST00000495509 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
PHF1-211ENST00000495509 TEPSINQ96N21 525 aa18.47■□□□□ 0.55
PHF1-211ENST00000495509 MYH8P13535 1937 aa18.47■□□□□ 0.55
PHF1-211ENST00000495509 COL2A1P02458 1487 aaPredicted RBP18.47■□□□□ 0.55
PHF1-211ENST00000495509 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
PHF1-211ENST00000495509 MCM2P49736 904 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms