RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, human

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXNA3-208	ENST00000495040	GPAT2	Q6NUI2	795 aa		32.48	■■■□□ 2.79
PLXNA3-208	ENST00000495040	TGFBRAP1	Q8WUH2	860 aa		32.48	■■■□□ 2.79
PLXNA3-208	ENST00000495040	TMED8	Q6PL24	325 aa	Predicted RBP	32.47	■■■□□ 2.79
PLXNA3-208	ENST00000495040	PARK7	Q99497	189 aa	Known RBP	32.47	■■■□□ 2.79
PLXNA3-208	ENST00000495040	APBB1	O00213	710 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	RAB11FIP3	O75154	756 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	CERS3	Q8IU89	383 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	MAPKAPK5	Q8IW41	473 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	CPA4	Q9UI42	421 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	NDUFB9	Q9Y6M9	179 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	FLT1	P17948	1338 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	ADGRA2	Q96PE1	1338 aa		32.46	■■■□□ 2.79
PLXNA3-208	ENST00000495040	GNRH1	P01148	92 aa		32.45	■■■□□ 2.79
PLXNA3-208	ENST00000495040	MAP3K12	Q12852	859 aa		32.45	■■■□□ 2.79
PLXNA3-208	ENST00000495040	GADL1	Q6ZQY3	521 aa		32.45	■■■□□ 2.79
PLXNA3-208	ENST00000495040	ANTXR1	Q9H6X2	564 aa		32.45	■■■□□ 2.79
PLXNA3-208	ENST00000495040	ATAD5	Q96QE3	1844 aa		32.44	■■■□□ 2.78
PLXNA3-208	ENST00000495040	TRIM75P	A6NK02	468 aa		32.44	■■■□□ 2.78
PLXNA3-208	ENST00000495040	CAP2	P40123	477 aa		32.44	■■■□□ 2.78
PLXNA3-208	ENST00000495040	MAGEB6	Q8N7X4	407 aa		32.44	■■■□□ 2.78
PLXNA3-208	ENST00000495040	ARMC5	Q96C12	935 aa		32.44	■■■□□ 2.78
PLXNA3-208	ENST00000495040	SLC45A1	Q9Y2W3	748 aa		32.44	■■■□□ 2.78
PLXNA3-208	ENST00000495040	IFIT2	P09913	472 aa	Known RBP	32.43	■■■□□ 2.78
PLXNA3-208	ENST00000495040	C20orf194	Q5TEA3	1177 aa		32.43	■■■□□ 2.78
PLXNA3-208	ENST00000495040	TBC1D2	Q9BYX2	928 aa		32.43	■■■□□ 2.78
PLXNA3-208	ENST00000495040	ARHGAP39	Q9C0H5	1083 aa		32.43	■■■□□ 2.78
PLXNA3-208	ENST00000495040	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	32.43	■■■□□ 2.78
PLXNA3-208	ENST00000495040	SIPA1L1	O43166	1804 aa		32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	DYNLL1	P63167	89 aa	Known RBP	32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	TTF1	Q15361	905 aa	Predicted RBP	32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	CCDC84	Q86UT8	332 aa	Predicted RBP	32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	FOXP4	Q8IVH2	680 aa	Predicted RBP	32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	PTCH2	Q9Y6C5	1203 aa		32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	ZSWIM8	A7E2V4	1837 aa		32.42	■■■□□ 2.78
PLXNA3-208	ENST00000495040	CYP2C8	P10632	490 aa		32.41	■■■□□ 2.78
PLXNA3-208	ENST00000495040	PRMT2	P55345	433 aa		32.41	■■■□□ 2.78
PLXNA3-208	ENST00000495040	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	32.41	■■■□□ 2.78
PLXNA3-208	ENST00000495040	METTL16	Q86W50	562 aa	Known RBP	32.4	■■■□□ 2.78
PLXNA3-208	ENST00000495040	MIGA1	Q8NAN2	632 aa		32.4	■■■□□ 2.78
PLXNA3-208	ENST00000495040	TRIM34	Q9BYJ4	488 aa		32.4	■■■□□ 2.78
PLXNA3-208	ENST00000495040	PALD1	Q9ULE6	856 aa		32.4	■■■□□ 2.78
PLXNA3-208	ENST00000495040	TNRC18	O15417	2968 aa	Predicted RBP	32.4	■■■□□ 2.78
PLXNA3-208	ENST00000495040	PDE4DIP	Q5VU43	2346 aa		32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	RRP1B	Q14684	758 aa	Known RBP	32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	SLC9C1	Q4G0N8	1177 aa		32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	NBPF11	Q86T75	865 aa		32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	ZNF280C	Q8ND82	737 aa		32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	CENPF	P49454	3210 aa		32.39	■■■□□ 2.78
PLXNA3-208	ENST00000495040	KIAA0100	Q14667	2235 aa	Known RBP	32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	MYH1	P12882	1939 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	USP17L5	A8MUK1	530 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	HLA-DOA	P06340	250 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	BCR	P11274	1271 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	PSMC4	P43686	418 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	SPP2	Q13103	211 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	AGTPBP1	Q9UPW5	1226 aa		32.38	■■■□□ 2.77
PLXNA3-208	ENST00000495040	PROCA1	Q8NCQ7	364 aa	Predicted RBP	32.37	■■■□□ 2.77
PLXNA3-208	ENST00000495040	AS3MT	Q9HBK9	375 aa		32.37	■■■□□ 2.77
PLXNA3-208	ENST00000495040	SAP30BP	Q9UHR5	308 aa	Known RBP	32.37	■■■□□ 2.77
PLXNA3-208	ENST00000495040	HOXD10	P28358	340 aa		32.36	■■■□□ 2.77
PLXNA3-208	ENST00000495040	USP5	P45974	858 aa		32.36	■■■□□ 2.77
PLXNA3-208	ENST00000495040	BCL11A	Q9H165	835 aa		32.36	■■■□□ 2.77
PLXNA3-208	ENST00000495040	DNAJC18	Q9H819	358 aa		32.36	■■■□□ 2.77
PLXNA3-208	ENST00000495040	RBBP6	Q7Z6E9	1792 aa	Known RBP	32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	ECM2	O94769	699 aa	Predicted RBP	32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	FMNL1	O95466	1100 aa	Predicted RBP	32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	ASNS	P08243	561 aa		32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	CTGF	P29279	349 aa		32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	ZNF333	Q96JL9	665 aa		32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	TRIM47	Q96LD4	638 aa		32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	GINM1	Q9NU53	330 aa		32.35	■■■□□ 2.77
PLXNA3-208	ENST00000495040	SMCR8	Q8TEV9	937 aa	Predicted RBP	32.34	■■■□□ 2.77
PLXNA3-208	ENST00000495040	DNAJC2	Q99543	621 aa	Known RBP	32.34	■■■□□ 2.77
PLXNA3-208	ENST00000495040	SRRD	Q9UH36	339 aa		32.34	■■■□□ 2.77
PLXNA3-208	ENST00000495040	PNMA3	Q9UL41	463 aa		32.34	■■■□□ 2.77
PLXNA3-208	ENST00000495040	LOC285556	D6RIA3	1793 aa		32.33	■■■□□ 2.77
PLXNA3-208	ENST00000495040	GOLIM4	O00461	696 aa		32.33	■■■□□ 2.77
PLXNA3-208	ENST00000495040	SLC9C2	Q5TAH2	1124 aa		32.33	■■■□□ 2.77
PLXNA3-208	ENST00000495040	MGAM	O43451	1857 aa		32.32	■■■□□ 2.76
PLXNA3-208	ENST00000495040	POTEF	A5A3E0	1075 aa		32.32	■■■□□ 2.76
PLXNA3-208	ENST00000495040	OSBP	P22059	807 aa		32.32	■■■□□ 2.76
PLXNA3-208	ENST00000495040	TREML2	Q5T2D2	321 aa		32.32	■■■□□ 2.76
PLXNA3-208	ENST00000495040	WDR18	Q9BV38	432 aa		32.32	■■■□□ 2.76
PLXNA3-208	ENST00000495040	TMEM106C	Q9BVX2	250 aa		32.32	■■■□□ 2.76
PLXNA3-208	ENST00000495040	MAGEB6P1	A0A0J9YX57	407 aa		32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	PDE6A	P16499	860 aa		32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	HMGCS2	P54868	508 aa		32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	FCGRT	P55899	365 aa		32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	PABPC4	Q13310	644 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	SH3D19	Q5HYK7	790 aa		32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	RIOK1	Q9BRS2	568 aa	Known RBP	32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	LRRCC1	Q9C099	1032 aa		32.31	■■■□□ 2.76
PLXNA3-208	ENST00000495040	SLC4A8	Q2Y0W8	1093 aa		32.3	■■■□□ 2.76
PLXNA3-208	ENST00000495040	GDF11	O95390	407 aa		32.29	■■■□□ 2.76
PLXNA3-208	ENST00000495040	ATP5J	P18859	108 aa		32.29	■■■□□ 2.76
PLXNA3-208	ENST00000495040	TTC6	Q86TZ1	520 aa		32.29	■■■□□ 2.76
PLXNA3-208	ENST00000495040	EHD4	Q9H223	541 aa		32.29	■■■□□ 2.76
PLXNA3-208	ENST00000495040	MYPN	Q86TC9	1320 aa		32.28	■■■□□ 2.76
PLXNA3-208	ENST00000495040	JAG1	P78504	1218 aa		32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms