RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
SNX17-209ENST00000494893 DHX36Q9H2U1 1008 aaKnown RBP20.67■□□□□ 0.9
SNX17-209ENST00000494893 OSBPL3Q9H4L5 887 aa20.67■□□□□ 0.9
SNX17-209ENST00000494893 HSPA8P11142 646 aaKnown RBP20.66■□□□□ 0.9
SNX17-209ENST00000494893 TM4SF4P48230 202 aa20.66■□□□□ 0.9
SNX17-209ENST00000494893 OTUD5Q96G74 571 aa20.66■□□□□ 0.9
SNX17-209ENST00000494893 MS4A4AQ96JQ5 239 aa20.66■□□□□ 0.9
SNX17-209ENST00000494893 CRNKL1Q9BZJ0 848 aaKnown RBP20.66■□□□□ 0.9
SNX17-209ENST00000494893 DCP1AQ9NPI6 582 aaPredicted RBP20.66■□□□□ 0.9
SNX17-209ENST00000494893 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.66■□□□□ 0.9
SNX17-209ENST00000494893 PI4KBQ9UBF8 816 aa20.66■□□□□ 0.9
SNX17-209ENST00000494893 TSKSQ9UJT2 592 aa20.66■□□□□ 0.9
SNX17-209ENST00000494893 ERO1BQ86YB8 467 aa20.65■□□□□ 0.9
SNX17-209ENST00000494893 APPBP2Q92624 585 aa20.65■□□□□ 0.9
SNX17-209ENST00000494893 FSD1Q9BTV5 496 aa20.65■□□□□ 0.9
SNX17-209ENST00000494893 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.65■□□□□ 0.9
SNX17-209ENST00000494893 RNF186Q9NXI6 227 aa20.65■□□□□ 0.9
SNX17-209ENST00000494893 M0R2C6 588 aa20.64■□□□□ 0.89
SNX17-209ENST00000494893 PLCD1P51178 756 aa20.64■□□□□ 0.89
SNX17-209ENST00000494893 JAG1P78504 1218 aa20.64■□□□□ 0.89
SNX17-209ENST00000494893 CENPQQ7L2Z9 268 aaPredicted RBP20.64■□□□□ 0.89
SNX17-209ENST00000494893 SCYL3Q8IZE3 742 aa20.64■□□□□ 0.89
SNX17-209ENST00000494893 AIDAQ96BJ3 306 aa20.64■□□□□ 0.89
SNX17-209ENST00000494893 STRBPQ96SI9 672 aaKnown RBP20.64■□□□□ 0.89
SNX17-209ENST00000494893 SEC62Q99442 399 aaKnown RBP20.64■□□□□ 0.89
SNX17-209ENST00000494893 HERC5Q9UII4 1024 aaKnown RBP20.64■□□□□ 0.89
SNX17-209ENST00000494893 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 TESPA1A2RU30 521 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 MANSC4A6NHS7 340 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 SMIM22K7EJ46 135 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 IGF2BP3O00425 579 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNX17-209ENST00000494893 IRF6O14896 467 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 ZFYP08048 801 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 CYP2D6P10635 497 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 PPIL2Q13356 520 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 SHROOM1Q2M3G4 852 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 ZMYM1Q5SVZ6 1142 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 CCDC84Q86UT8 332 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 FOXP4Q8IVH2 680 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 REM2Q8IYK8 340 aaPredicted RBP20.63■□□□□ 0.89
SNX17-209ENST00000494893 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 PTPN18Q99952 460 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 MYH1P12882 1939 aa20.63■□□□□ 0.89
SNX17-209ENST00000494893 CTNND1O60716 968 aaKnown RBP20.62■□□□□ 0.89
SNX17-209ENST00000494893 CTCFP49711 727 aaPredicted RBP20.62■□□□□ 0.89
SNX17-209ENST00000494893 PPATQ06203 517 aa20.62■□□□□ 0.89
SNX17-209ENST00000494893 BRI3BPQ8WY22 251 aa20.62■□□□□ 0.89
SNX17-209ENST00000494893 DOCK1Q14185 1865 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 TRPA1O75762 1119 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 HLA-DOAP06340 250 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 PTPRAP18433 802 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 CAP2P40123 477 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 LBX1P52954 281 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 GABPAQ06546 454 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 SREBF2Q12772 1141 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 BEGAINQ9BUH8 593 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 EHD4Q9H223 541 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 ATP8A2Q9NTI2 1148 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 MCM9Q9NXL9 1143 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
SNX17-209ENST00000494893 GSG1L2A8MUP6 293 aa20.6■□□□□ 0.89
SNX17-209ENST00000494893 GPAA1O43292 621 aa20.6■□□□□ 0.89
SNX17-209ENST00000494893 CA12O43570 354 aa20.6■□□□□ 0.89
SNX17-209ENST00000494893 IFNL1Q8IU54 200 aa20.6■□□□□ 0.89
SNX17-209ENST00000494893 SAGE1Q9NXZ1 904 aa20.6■□□□□ 0.89
SNX17-209ENST00000494893 KCNH4Q9UQ05 1017 aa20.6■□□□□ 0.89
SNX17-209ENST00000494893 CYP2D7A0A087X1C5 515 aa20.59■□□□□ 0.89
SNX17-209ENST00000494893 MOGSQ13724 837 aa20.59■□□□□ 0.89
SNX17-209ENST00000494893 TTC6Q86TZ1 520 aa20.59■□□□□ 0.89
SNX17-209ENST00000494893 CRACR2BQ8N4Y2 399 aaPredicted RBP20.59■□□□□ 0.89
SNX17-209ENST00000494893 R3HDMLQ9H3Y0 253 aa20.59■□□□□ 0.89
SNX17-209ENST00000494893 EPB41L4AQ9HCS5 686 aaPredicted RBP20.59■□□□□ 0.89
SNX17-209ENST00000494893 SERPINB13Q9UIV8 391 aa20.59■□□□□ 0.89
SNX17-209ENST00000494893 PHIPQ8WWQ0 1821 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 CCL15-CCL14A0A0B4J2E2 113 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 FOXP2O15409 715 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 SHMT1P34896 483 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 GTF2A2P52657 109 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 INHBEP58166 350 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 CCL15Q16663 113 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 AFG3L2Q9Y4W6 797 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 ZHX2Q9Y6X8 837 aa20.58■□□□□ 0.89
SNX17-209ENST00000494893 TRIM6-TRIM34B2RNG4 842 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 USP17L12C9JPN9 530 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 USP17L21D6R901 530 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 GDF11O95390 407 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 POLR3DP05423 398 aaPredicted RBP20.57■□□□□ 0.88
SNX17-209ENST00000494893 GSPT1P15170 499 aaKnown RBP20.57■□□□□ 0.88
SNX17-209ENST00000494893 LRRFIP1Q32MZ4 808 aaKnown RBP20.57■□□□□ 0.88
SNX17-209ENST00000494893 C12orf60Q5U649 245 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 CTR9Q6PD62 1173 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 DYNLL2Q96FJ2 89 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 FAM227BQ96M60 508 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
SNX17-209ENST00000494893 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 TBC1D8O95759 1140 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 SNAPC2Q13487 334 aa20.56■□□□□ 0.88
SNX17-209ENST00000494893 COL13A1Q5TAT6 717 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms