RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 GCKRQ14397 625 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 CCDC129Q6ZRS4 1044 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 HERVK_113Q902F9 699 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 CHMP4AQ9BY43 222 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 DAGLAQ9Y4D2 1042 aa13.96□□□□□ -0.17
TRIM59-206ENST00000494486 MYH3P11055 1940 aa13.96□□□□□ -0.18
TRIM59-206ENST00000494486 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
TRIM59-206ENST00000494486 RAG1P15918 1043 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 ITGB8P26012 769 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 CNGA1P29973 690 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 MAP3K10Q02779 954 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 MORN1Q5T089 497 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 GJC2Q5T442 439 aaPredicted RBP13.95□□□□□ -0.18
TRIM59-206ENST00000494486 LDHAL6AQ6ZMR3 332 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 VPS37DQ86XT2 251 aa13.95□□□□□ -0.18
TRIM59-206ENST00000494486 KHSRPQ92945 711 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM59-206ENST00000494486 UTYO14607 1347 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 KIAA0355O15063 1070 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 TLL1O43897 1013 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 PBX2P40425 430 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 CASP7P55210 303 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 TLE2Q04725 743 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 NFIAQ12857 509 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 CDC42EP5Q6NZY7 148 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 FBXO33Q7Z6M2 555 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 CCAR1Q8IX12 1150 aaKnown RBP13.94□□□□□ -0.18
TRIM59-206ENST00000494486 CNNM1Q9NRU3 951 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 FAM198AQ9UFP1 575 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 ATRNL1Q5VV63 1379 aa13.94□□□□□ -0.18
TRIM59-206ENST00000494486 TCF20Q9UGU0 1960 aaKnown RBP13.93□□□□□ -0.18
TRIM59-206ENST00000494486 PLXNB2O15031 1838 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 ST18O60284 1047 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 CLTBP09497 229 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 SKIV2LQ15477 1246 aaKnown RBP13.93□□□□□ -0.18
TRIM59-206ENST00000494486 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 EDC3Q96F86 508 aaKnown RBP13.93□□□□□ -0.18
TRIM59-206ENST00000494486 FBXL18Q96ME1 805 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 TBC1D2Q9BYX2 928 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 MSRAQ9UJ68 235 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 COG5Q9UP83 839 aa13.93□□□□□ -0.18
TRIM59-206ENST00000494486 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
TRIM59-206ENST00000494486 SPP2Q13103 211 aa13.92□□□□□ -0.18
TRIM59-206ENST00000494486 MAP2K5Q13163 448 aa13.92□□□□□ -0.18
TRIM59-206ENST00000494486 RAB30Q15771 203 aa13.92□□□□□ -0.18
TRIM59-206ENST00000494486 CCDC30Q5VVM6 783 aa13.92□□□□□ -0.18
TRIM59-206ENST00000494486 CCDC174Q6PII3 467 aa13.92□□□□□ -0.18
TRIM59-206ENST00000494486 GPR142Q7Z601 462 aa13.92□□□□□ -0.18
TRIM59-206ENST00000494486 ADCYAP1R1P41586 468 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
TRIM59-206ENST00000494486 NEUROD2Q15784 382 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 CCDC57Q2TAC2 916 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 CAVIN4Q5BKX8 364 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 TAF7LQ5H9L4 462 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 ZFPM1Q8IX07 1006 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 MICALL1Q8N3F8 863 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 UIMC1Q96RL1 719 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 MYH16Q9H6N6 1097 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 CHMP3Q9Y3E7 222 aa13.91□□□□□ -0.18
TRIM59-206ENST00000494486 GRXCR1A8MXD5 290 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
TRIM59-206ENST00000494486 ENTPD3O75355 529 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 HMGCS2P54868 508 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 ATP2B2Q01814 1243 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 SH3D19Q5HYK7 790 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 RASIP1Q5U651 963 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 CCDC84Q86UT8 332 aaPredicted RBP13.9□□□□□ -0.18
TRIM59-206ENST00000494486 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRIM59-206ENST00000494486 SLC28A3Q9HAS3 691 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 TXNRD2Q9NNW7 524 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 MBIPQ9NS73 344 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 USP40Q9NVE5 1235 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 TRIM35Q9UPQ4 493 aa13.9□□□□□ -0.18
TRIM59-206ENST00000494486 GLRX3O76003 335 aaKnown RBP13.89□□□□□ -0.19
TRIM59-206ENST00000494486 HOXA7P31268 230 aaPredicted RBP13.89□□□□□ -0.19
TRIM59-206ENST00000494486 FOXO4P98177 505 aa13.89□□□□□ -0.19
TRIM59-206ENST00000494486 CSPP1Q1MSJ5 1256 aa13.89□□□□□ -0.19
TRIM59-206ENST00000494486 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
TRIM59-206ENST00000494486 CWC22Q9HCG8 908 aaKnown RBP13.89□□□□□ -0.19
TRIM59-206ENST00000494486 TMEM39AQ9NV64 488 aa13.89□□□□□ -0.19
TRIM59-206ENST00000494486 FLRT1Q9NZU1 646 aa13.89□□□□□ -0.19
TRIM59-206ENST00000494486 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
TRIM59-206ENST00000494486 RBPJLQ9UBG7 517 aa13.89□□□□□ -0.19
TRIM59-206ENST00000494486 CLSPNQ9HAW4 1339 aa13.89□□□□□ -0.19
TRIM59-206ENST00000494486 HERVK_113P62684 666 aa13.88□□□□□ -0.19
TRIM59-206ENST00000494486 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
TRIM59-206ENST00000494486 ERVK-24P63145 666 aa13.88□□□□□ -0.19
TRIM59-206ENST00000494486 Q3C1V9 767 aa13.88□□□□□ -0.19
TRIM59-206ENST00000494486 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
TRIM59-206ENST00000494486 GTF3C2Q8WUA4 911 aaPredicted RBP13.88□□□□□ -0.19
TRIM59-206ENST00000494486 FERMT2Q96AC1 680 aa13.88□□□□□ -0.19
TRIM59-206ENST00000494486 PORCNQ9H237 461 aa13.88□□□□□ -0.19
TRIM59-206ENST00000494486 PEX10O60683 326 aa13.87□□□□□ -0.19
TRIM59-206ENST00000494486 TMEM240Q5SV17 173 aa13.87□□□□□ -0.19
TRIM59-206ENST00000494486 SLC44A5Q8NCS7 719 aa13.87□□□□□ -0.19
TRIM59-206ENST00000494486 TRPV1Q8NER1 839 aa13.87□□□□□ -0.19
TRIM59-206ENST00000494486 IDI2Q9BXS1 227 aa13.87□□□□□ -0.19
TRIM59-206ENST00000494486 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms