RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 TACC1O75410 805 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 ZNF202O95125 648 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 GINS2Q9Y248 185 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
COL25A1-204ENST00000494183 KRT86O43790 486 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 CUTAO60888 179 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 TBC1D8BQ0IIM8 1120 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 KRT25Q7Z3Z0 450 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 LZTFL1Q9NQ48 299 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
COL25A1-204ENST00000494183 REXO1Q8N1G1 1221 aaKnown RBP13.14□□□□□ -0.31
COL25A1-204ENST00000494183 SNX29Q8TEQ0 813 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 VPS16Q9H269 839 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 ERCC6L2Q5T890 1561 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 KRT83P78385 493 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 CBX1P83916 185 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 GUCA1BQ9UMX6 200 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 TNKSO95271 1327 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 RAPGEF1Q13905 1077 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 DDX39AO00148 427 aaKnown RBP13.14□□□□□ -0.31
COL25A1-204ENST00000494183 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-204ENST00000494183 NCAPH2Q6IBW4 605 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 MAEAQ7L5Y9 396 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 FANCBQ8NB91 859 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 LZTS2Q9BRK4 669 aa13.14□□□□□ -0.31
COL25A1-204ENST00000494183 CYP27B1O15528 508 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 SERPINB2P05120 415 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 KARSQ15046 597 aaKnown RBP13.13□□□□□ -0.31
COL25A1-204ENST00000494183 NLRP10Q86W26 655 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
COL25A1-204ENST00000494183 HOOK2Q96ED9 719 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-204ENST00000494183 TTC16Q8NEE8 873 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-204ENST00000494183 CGNQ9P2M7 1197 aaKnown RBP13.13□□□□□ -0.31
COL25A1-204ENST00000494183 CTAGE15A4D2H0 777 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 CTAGE8P0CG41 777 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 GJC1P36383 396 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 CTAGE6Q86UF2 777 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 CTAGE4Q8IX94 777 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 KIFC2Q96AC6 838 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
COL25A1-204ENST00000494183 GOLGA6L10A0A0M3HER8 536 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 DYMQ7RTS9 669 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 BIN2Q9UBW5 565 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-204ENST00000494183 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ZBED4O75132 1171 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ERCC3P19447 782 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 CA8P35219 290 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 BTDP43251 543 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 BIRC3Q13489 604 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 UBE3CQ15386 1083 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 NOC4LQ9BVI4 516 aaKnown RBP13.12□□□□□ -0.31
COL25A1-204ENST00000494183 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 MAATS1Q7Z4T9 603 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 CSGALNACT2Q8N6G5 542 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ZSCAN10Q96SZ4 725 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 FRMD4BQ9Y2L6 1034 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ANKARQ7Z5J8 1434 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 TCP10L2B9ZVM9 353 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-204ENST00000494183 RBSNQ9H1K0 784 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.12□□□□□ -0.31
COL25A1-204ENST00000494183 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
COL25A1-204ENST00000494183 BRD1O95696 1058 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 TNFAIP1Q13829 316 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CNNM4Q6P4Q7 775 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 ZCCHC11Q5TAX3 1644 aaKnown RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 NOP56O00567 594 aaKnown RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 EEF2P13639 858 aaKnown RBP13.11□□□□□ -0.31
COL25A1-204ENST00000494183 SMTNP53814 917 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 FNBP1Q96RU3 617 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 FERMT1Q9BQL6 677 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 SELENOOQ9BVL4 669 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 CLSTN2Q9H4D0 955 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
COL25A1-204ENST00000494183 KLRF2D3W0D1 207 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms