RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 KCNH4Q9UQ05 1017 aa12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 TNNQ9UQP3 1299 aa12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 JAG2Q9Y219 1238 aa12.77□□□□□ -0.37
PDLIM1-205ENST00000493949 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 KCNJ4P48050 445 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 CHRNDQ07001 517 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 MOGSQ13724 837 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 ZNF804AQ7Z570 1209 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 ZKSCAN4Q969J2 545 aaPredicted RBP12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 WRNIP1Q96S55 665 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 PTPRFP10586 1907 aa12.76□□□□□ -0.37
PDLIM1-205ENST00000493949 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 TCP10L2B9ZVM9 353 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 ELNP15502 786 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 FLT3LGP49771 235 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 C8orf58Q8NAV2 365 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 HOOK2Q96ED9 719 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 MPHOSPH8Q99549 860 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 PLA2G12BQ9BX93 195 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
PDLIM1-205ENST00000493949 SYN1P17600 705 aa12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 ITGA6P23229 1130 aa12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 PLA2G5P39877 138 aa12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 POTEGQ6S5H5 508 aa12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 MTERF4Q7Z6M4 381 aaKnown RBP12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 FAM83AQ86UY5 434 aa12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 ZSCAN30Q86W11 494 aa12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 PARK7Q99497 189 aaKnown RBP12.74□□□□□ -0.37
PDLIM1-205ENST00000493949 RPAP1Q9BWH6 1393 aaPredicted RBP12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 AK9Q5TCS8 1911 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 H7C1W4 665 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 EPB41L2O43491 1005 aaKnown RBP12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 CSF1RP07333 972 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 FKBP1CQ5VVH2 108 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 MRPL50Q8N5N7 158 aaKnown RBP12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 KIF2CQ99661 725 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 PANK2Q9BZ23 570 aa12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 TTF2Q9UNY4 1162 aaKnown RBP12.73□□□□□ -0.37
PDLIM1-205ENST00000493949 TAF5LO75529 589 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 CRKP46108 304 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 MCM2P49736 904 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 DCAF15Q66K64 600 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 GPAT2Q6NUI2 795 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 TSPYL6Q8N831 410 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
PDLIM1-205ENST00000493949 PI4KAP2A4QPH2 592 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 ST18O60284 1047 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 HDLBPQ00341 1268 aaKnown RBP12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 CSPP1Q1MSJ5 1256 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 ASTLQ6HA08 431 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 G2E3Q7L622 706 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 UBE3BQ7Z3V4 1068 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 PI4KAP1Q8N8J0 262 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 TDRD7Q8NHU6 1098 aaKnown RBP12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 LNPKQ9C0E8 428 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 C11orf49Q9H6J7 331 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 ZNF112Q9UJU3 913 aa12.71□□□□□ -0.37
PDLIM1-205ENST00000493949 CXCL11O14625 94 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 TNPO2O14787 897 aaKnown RBP12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 OFD1O75665 1012 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 REC8O95072 547 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 MBD3O95983 291 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 CYP2C8P10632 490 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 MSNP26038 577 aaKnown RBP12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 KSR2Q6VAB6 950 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 RPAP2Q8IXW5 612 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 CDX2Q99626 313 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 ZNF341Q9BYN7 854 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 GZF1Q9H116 711 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 PDCL3Q9H2J4 239 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 OGDHLQ9ULD0 1010 aa12.7□□□□□ -0.38
PDLIM1-205ENST00000493949 PLXNB2O15031 1838 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 PHIPQ8WWQ0 1821 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 MAST2Q6P0Q8 1798 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 PTPRCP08575 1304 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 NEURL1BA8MQ27 555 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 ZNF500O60304 480 aaPredicted RBP12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 VAMP4O75379 141 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 BAG4O95429 457 aaKnown RBP12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 INPP5BP32019 993 aa12.69□□□□□ -0.38
PDLIM1-205ENST00000493949 CASP7P55210 303 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms