RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 CCDC13Q8IYE1 715 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.02
BRCA1-221ENST00000493795 CARD10Q9BWT7 1032 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 RAD50Q92878 1312 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 LRPPRCP42704 1394 aaKnown RBP8.71□□□□□ -1.02
BRCA1-221ENST00000493795 PRIM1P49642 420 aaKnown RBP8.71□□□□□ -1.02
BRCA1-221ENST00000493795 MMEL1Q495T6 779 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 CTAGE3PQ8IX95 158 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 OSCARQ8IYS5 282 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 RSAD2Q8WXG1 361 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 TMOD4Q9NZQ9 345 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 RAP1GDS1P52306 607 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 RPS6KA1Q15418 735 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 SCYL1Q96KG9 808 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 SH2D4AQ9H788 454 aa8.71□□□□□ -1.02
BRCA1-221ENST00000493795 SPATS2LQ9NUQ6 558 aaKnown RBP8.71□□□□□ -1.02
BRCA1-221ENST00000493795 GOLGA8KD6RF30 607 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 S100BP04271 92 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 USHBP1Q8N6Y0 703 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 RHPN1Q8TCX5 695 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 GRK7Q8WTQ7 553 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 HOMER3Q9NSC5 361 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 EXOC5O00471 708 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 PARP1P09874 1014 aaKnown RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SESN3P58005 492 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SPDYE2Q495Y8 402 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 RSBN1LQ6PCB5 846 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SND1Q7KZF4 910 aaKnown RBP eCLIP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SLC52A1Q9NWF4 448 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 FLOT1O75955 427 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 BCRP11274 1271 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 YWHAEP62258 255 aaKnown RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 ESRRGP62508 458 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 CEP19Q96LK0 163 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 CARD6Q9BX69 1037 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 VEZTQ9HBM0 779 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 ZNF644Q9H582 1327 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 OATP04181 439 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 TSHZ3Q63HK5 1081 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 POMGNT1Q8WZA1 660 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 VPS16Q9H269 839 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 BIN2Q9UBW5 565 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SYNRGQ9UMZ2 1314 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 SBNO2Q9Y2G9 1366 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 DAPK1P53355 1430 aa8.7□□□□□ -1.02
BRCA1-221ENST00000493795 GARSP41250 739 aaKnown RBP8.69□□□□□ -1.02
BRCA1-221ENST00000493795 SNCBQ16143 134 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 TMTC4Q5T4D3 741 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 BSPRYQ5W0U4 402 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CHMP6Q96FZ7 201 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 NPHP3Q7Z494 1330 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 VWA3AA6NCI4 1184 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 RLBP1P12271 317 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 TRIM27P14373 513 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 ATICP31939 592 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 SLC9C2Q5TAH2 1124 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 PEX26Q7Z412 305 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 HDAC11Q96DB2 347 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CD2APQ9Y5K6 639 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 PTPDC1A2A3K4 754 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 GNGT2O14610 69 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 SART1O43290 800 aaKnown RBP8.69□□□□□ -1.02
BRCA1-221ENST00000493795 P4HA1P13674 534 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CTNNA1P35221 906 aaKnown RBP8.69□□□□□ -1.02
BRCA1-221ENST00000493795 PEX19P40855 299 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 LONRF2Q1L5Z9 754 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 PKD2L1Q9P0L9 805 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CASP2P42575 452 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CSGALNACT2Q8N6G5 542 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 ATP6V0A1Q93050 837 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 AMOTL2Q9Y2J4 779 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 SCINQ9Y6U3 715 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.69□□□□□ -1.02
BRCA1-221ENST00000493795 NAIPQ13075 1403 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 SF3A3Q12874 501 aaKnown RBP eCLIP8.69□□□□□ -1.02
BRCA1-221ENST00000493795 ELF2Q15723 593 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 C16orf71Q8IYS4 520 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CCDC138Q96M89 665 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 TCEANC2Q96MN5 208 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 CCDC68Q9H2F9 335 aa8.69□□□□□ -1.02
BRCA1-221ENST00000493795 PRPF6O94906 941 aaKnown RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 SDSP20132 328 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 GNGT1P63211 74 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 PAK1Q13153 545 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 KRT81Q14533 505 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 FCHSD1Q86WN1 690 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 FNBP4Q8N3X1 1017 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 ABTB1Q969K4 478 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 HAUS1Q96CS2 278 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 GPHNQ9NQX3 736 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 RAB20Q9NX57 234 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 EPS15L1Q9UBC2 864 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 IPO11Q9UI26 975 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms