RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 EDC3Q96F86 508 aaKnown RBP8.44□□□□□ -1.06
TOP3A-207ENST00000493648 MS4A4AQ96JQ5 239 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 PICK1Q9NRD5 415 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 HERC5Q9UII4 1024 aaKnown RBP8.44□□□□□ -1.06
TOP3A-207ENST00000493648 TTC41PQ6P2S7 1318 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 ZNF532Q9HCE3 1301 aa8.44□□□□□ -1.06
TOP3A-207ENST00000493648 COL2A1P02458 1487 aaPredicted RBP8.44□□□□□ -1.06
TOP3A-207ENST00000493648 DOCK2Q92608 1830 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 OTOFQ9HC10 1997 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 CASP8AP2Q9UKL3 1982 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 TCRBV5S4A2TA0A5A2 114 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 CXCL11O14625 94 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 IRF6O14896 467 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 UBE3CQ15386 1083 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 LRRFIP1Q32MZ4 808 aaKnown RBP8.43□□□□□ -1.06
TOP3A-207ENST00000493648 TTC6Q86TZ1 520 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 CRACR2BQ8N4Y2 399 aaPredicted RBP8.43□□□□□ -1.06
TOP3A-207ENST00000493648 CFHR5Q9BXR6 569 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 CRNKL1Q9BZJ0 848 aaKnown RBP8.43□□□□□ -1.06
TOP3A-207ENST00000493648 SAP30BPQ9UHR5 308 aaKnown RBP8.43□□□□□ -1.06
TOP3A-207ENST00000493648 PALD1Q9ULE6 856 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 ZHX2Q9Y6X8 837 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 FLT1P17948 1338 aa8.43□□□□□ -1.06
TOP3A-207ENST00000493648 GPR25O00155 361 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 IGF2BP3O00425 579 aaKnown RBP eCLIP8.42□□□□□ -1.06
TOP3A-207ENST00000493648 GLRX3O76003 335 aaKnown RBP8.42□□□□□ -1.06
TOP3A-207ENST00000493648 POLR3DP05423 398 aaPredicted RBP8.42□□□□□ -1.06
TOP3A-207ENST00000493648 PTPRAP18433 802 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 MX1P20591 662 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 CAP2P40123 477 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
TOP3A-207ENST00000493648 FASTKD5Q7L8L6 764 aaKnown RBP8.42□□□□□ -1.06
TOP3A-207ENST00000493648 KBTBD3Q8NAB2 608 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 BRI3BPQ8WY22 251 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 PTPN18Q99952 460 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 RIOK1Q9BRS2 568 aaKnown RBP8.42□□□□□ -1.06
TOP3A-207ENST00000493648 ZFYVE28Q9HCC9 887 aa8.42□□□□□ -1.06
TOP3A-207ENST00000493648 PCNTO95613 3336 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 MYH1P12882 1939 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 CDK5RAP2Q96SN8 1893 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 FOCADQ5VW36 1801 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 RNF113AO15541 343 aaKnown RBP8.41□□□□□ -1.06
TOP3A-207ENST00000493648 FKTNO75072 461 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 IGHDP01880 384 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 ZFYP08048 801 aaPredicted RBP8.41□□□□□ -1.06
TOP3A-207ENST00000493648 SLURP2P0DP57 97 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 TSHZ3Q63HK5 1081 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 B4GALNT3Q6L9W6 998 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 METTL16Q86W50 562 aaKnown RBP8.41□□□□□ -1.06
TOP3A-207ENST00000493648 SMC5Q8IY18 1101 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 ZNF296Q8WUU4 475 aaPredicted RBP8.41□□□□□ -1.06
TOP3A-207ENST00000493648 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 TBC1D2Q9BYX2 928 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 ARMT1Q9H993 441 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 AS3MTQ9HBK9 375 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 ZCCHC17Q9NP64 241 aaKnown RBP8.41□□□□□ -1.06
TOP3A-207ENST00000493648 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 MCM9Q9NXL9 1143 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 AFG3L2Q9Y4W6 797 aa8.41□□□□□ -1.06
TOP3A-207ENST00000493648 LAMB1P07942 1786 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 USP17L5A8MUK1 530 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 BTBD19C9JJ37 291 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 MBD4O95243 580 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 ASNSP08243 561 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 IRX6P78412 446 aaPredicted RBP8.4□□□□□ -1.06
TOP3A-207ENST00000493648 CRHR2Q13324 411 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 DGKZQ13574 1117 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 TAF1CQ15572 869 aaPredicted RBP8.4□□□□□ -1.06
TOP3A-207ENST00000493648 SLC4A8Q2Y0W8 1093 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 ANKRD23Q86SG2 305 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 AMOTL1Q8IY63 956 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 FAM43AQ8N2R8 423 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 LCORLQ8N3X6 602 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 PI4K2BQ8TCG2 481 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.06
TOP3A-207ENST00000493648 EHD4Q9H223 541 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 R3HDMLQ9H3Y0 253 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 ATP8A2Q9NTI2 1148 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 STAP2Q9UGK3 403 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 SERPINB13Q9UIV8 391 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 SLC4A4Q9Y6R1 1079 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 MYH7P12883 1935 aa8.4□□□□□ -1.06
TOP3A-207ENST00000493648 A0A0G2JLL6 359 aaPredicted RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 TRIM75PA6NK02 468 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 PDHXO00330 501 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 GNAT2P19087 354 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 PLCD1P51178 756 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 PDE1AP54750 535 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 SP3Q02447 781 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 SPP2Q13103 211 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 RRP1BQ14684 758 aaKnown RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 ARHGEF6Q15052 776 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 PKN2Q16513 984 aaKnown RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 SLFNL1Q499Z3 407 aa8.39□□□□□ -1.07
TOP3A-207ENST00000493648 CERKLQ49MI3 558 aaPredicted RBP8.39□□□□□ -1.07
TOP3A-207ENST00000493648 TATDN1Q6P1N9 297 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms