RNA–Protein interactions for RNA: ENST00000493358.1

SNED1-212, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-212ENST00000493358 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
SNED1-212ENST00000493358 HERC5Q9UII4 1024 aaKnown RBP16.36■□□□□ 0.21
SNED1-212ENST00000493358 AFG3L2Q9Y4W6 797 aa16.36■□□□□ 0.21
SNED1-212ENST00000493358 HMMRO75330 724 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
SNED1-212ENST00000493358 PSMC4P43686 418 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 SLC4A8Q2Y0W8 1093 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
SNED1-212ENST00000493358 SMCR8Q8TEV9 937 aaPredicted RBP16.35■□□□□ 0.21
SNED1-212ENST00000493358 ZNF333Q96JL9 665 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 DBNLQ9UJU6 430 aaKnown RBP16.35■□□□□ 0.21
SNED1-212ENST00000493358 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 SLC45A1Q9Y2W3 748 aa16.35■□□□□ 0.21
SNED1-212ENST00000493358 POTEFA5A3E0 1075 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
SNED1-212ENST00000493358 CYP2E1P05181 493 aaPredicted RBP16.34■□□□□ 0.21
SNED1-212ENST00000493358 ZAP70P43403 619 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 FCGRTP55899 365 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 CAP1Q01518 475 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 MOGSQ13724 837 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 AACSQ86V21 672 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 CRACR2BQ8N4Y2 399 aaPredicted RBP16.34■□□□□ 0.21
SNED1-212ENST00000493358 RAET1EQ8TD07 263 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 AS3MTQ9HBK9 375 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 PI4KBQ9UBF8 816 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 DDX19BQ9UMR2 479 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 ADGRA2Q96PE1 1338 aa16.34■□□□□ 0.21
SNED1-212ENST00000493358 HLA-DOAP06340 250 aa16.33■□□□□ 0.2
SNED1-212ENST00000493358 CYP2C8P10632 490 aa16.33■□□□□ 0.2
SNED1-212ENST00000493358 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNED1-212ENST00000493358 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
SNED1-212ENST00000493358 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
SNED1-212ENST00000493358 TLR7Q9NYK1 1049 aaKnown RBP16.33■□□□□ 0.2
SNED1-212ENST00000493358 SRRDQ9UH36 339 aa16.33■□□□□ 0.2
SNED1-212ENST00000493358 MYPNQ86TC9 1320 aa16.33■□□□□ 0.2
SNED1-212ENST00000493358 FLT1P17948 1338 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 CYP7A1P22680 504 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 PPP4CP60510 307 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 MAP3K12Q12852 859 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 TMED8Q6PL24 325 aaPredicted RBP16.32■□□□□ 0.2
SNED1-212ENST00000493358 MAPKAPK5Q8IW41 473 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 AGTPBP1Q9UPW5 1226 aa16.32■□□□□ 0.2
SNED1-212ENST00000493358 USP17L5A8MUK1 530 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 MYCP01106 439 aaPredicted RBP16.31■□□□□ 0.2
SNED1-212ENST00000493358 SLURP2P0DP57 97 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 BCRP11274 1271 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 OSBPP22059 807 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 CAP2P40123 477 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 CLASRPQ8N2M8 674 aaKnown RBP16.31■□□□□ 0.2
SNED1-212ENST00000493358 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
SNED1-212ENST00000493358 ZNF280CQ8ND82 737 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 SH3TC2Q8TF17 1288 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 TRIM47Q96LD4 638 aa16.31■□□□□ 0.2
SNED1-212ENST00000493358 PIH1D3Q9NQM4 214 aaKnown RBP16.31■□□□□ 0.2
SNED1-212ENST00000493358 ASNSP08243 561 aa16.3■□□□□ 0.2
SNED1-212ENST00000493358 USP5P45974 858 aa16.3■□□□□ 0.2
SNED1-212ENST00000493358 SPP2Q13103 211 aa16.3■□□□□ 0.2
SNED1-212ENST00000493358 CCDC84Q86UT8 332 aaPredicted RBP16.3■□□□□ 0.2
SNED1-212ENST00000493358 RPAP2Q8IXW5 612 aaPredicted RBP16.3■□□□□ 0.2
SNED1-212ENST00000493358 MAGEB6Q8N7X4 407 aa16.3■□□□□ 0.2
SNED1-212ENST00000493358 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.3■□□□□ 0.2
SNED1-212ENST00000493358 BIN2Q9UBW5 565 aaPredicted RBP16.3■□□□□ 0.2
SNED1-212ENST00000493358 APBB1O00213 710 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 IFIT2P09913 472 aaKnown RBP16.29■□□□□ 0.2
SNED1-212ENST00000493358 EN2P19622 333 aaPredicted RBP16.29■□□□□ 0.2
SNED1-212ENST00000493358 GRK4P32298 578 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 HMGCS2P54868 508 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 UBXN2AP68543 259 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 TTF1Q15361 905 aaPredicted RBP16.29■□□□□ 0.2
SNED1-212ENST00000493358 ADGRA1Q86SQ6 560 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
SNED1-212ENST00000493358 RHPN1Q8TCX5 695 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 KIF1BPQ96EK5 621 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 IL1RAPL2Q9NP60 686 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 GINM1Q9NU53 330 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 TMOD4Q9NZQ9 345 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 RCAN3Q9UKA8 241 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
SNED1-212ENST00000493358 BAZ2AQ9UIF9 1905 aaKnown RBP16.29■□□□□ 0.2
SNED1-212ENST00000493358 DDX60LQ5H9U9 1706 aaKnown RBP16.28■□□□□ 0.2
SNED1-212ENST00000493358 TNPO2O14787 897 aaKnown RBP16.28■□□□□ 0.2
SNED1-212ENST00000493358 MIGA1Q8NAN2 632 aa16.28■□□□□ 0.2
SNED1-212ENST00000493358 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
SNED1-212ENST00000493358 SAP30BPQ9UHR5 308 aaKnown RBP16.28■□□□□ 0.2
SNED1-212ENST00000493358 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
SNED1-212ENST00000493358 BRCA2P51587 3418 aa16.28■□□□□ 0.2
SNED1-212ENST00000493358 CEP290O15078 2479 aa16.28■□□□□ 0.2
SNED1-212ENST00000493358 CTGFP29279 349 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 GCLCP48506 637 aaPredicted RBP16.27■□□□□ 0.2
SNED1-212ENST00000493358 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
SNED1-212ENST00000493358 PRKCZQ05513 592 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 ANKRD13CQ8N6S4 541 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 SLAIN1Q8ND83 568 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
SNED1-212ENST00000493358 COA7Q96BR5 231 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms