RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 CCDC69A6NI79 296 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 GSG1L2A8MUP6 293 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 TCP10L2B9ZVM9 353 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 M0R2C6 588 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 TBC1D12O60347 775 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 RANBP6O60518 1105 aaKnown RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 ASNSP08243 561 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 CALM1P0DP23 149 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 CALM2P0DP24 149 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 CALM3P0DP25 149 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 DYNLL1P63167 89 aaKnown RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 FKBP1BP68106 108 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 TCP10Q12799 353 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 TTLL12Q14166 644 aaPredicted RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 C12orf60Q5U649 245 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 NFXL1Q6ZNB6 911 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 DHX32Q7L7V1 743 aaKnown RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 LDHDQ86WU2 507 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 C2orf69Q8N8R5 385 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 SH3RF3Q8TEJ3 882 aaPredicted RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 SDR42E1Q8WUS8 393 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 STAG1Q8WVM7 1258 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 SEC62Q99442 399 aaKnown RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 LSG1Q9H089 658 aaKnown RBP6.27□□□□□ -1.41
NEK4-205ENST00000493199 DEFB129Q9H1M3 183 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.27□□□□□ -1.41
NEK4-205ENST00000493199 KCNQ5Q9NR82 932 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 CSADQ9Y600 493 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 MYH7P12883 1935 aa6.27□□□□□ -1.41
NEK4-205ENST00000493199 FLT1P17948 1338 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 MAST2Q6P0Q8 1798 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 CLRN2A0PK11 232 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 MPHOSPH10O00566 681 aaKnown RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 SLC27A2O14975 620 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 CDKL5O76039 1030 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 CASTP20810 708 aaKnown RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 KIF5BP33176 963 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 GNAQP50148 359 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 NEK4P51957 841 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 RHBDL3P58872 404 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 AKAP17AQ02040 695 aaKnown RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 RASA3Q14644 834 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 CERKLQ49MI3 558 aaPredicted RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 RRP12Q5JTH9 1297 aaKnown RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 VPS53Q5VIR6 699 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 CTR9Q6PD62 1173 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 CCDC129Q6ZRS4 1044 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 RUFY3Q7L099 469 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 SAMD7Q7Z3H4 446 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 KRT26Q7Z3Y9 468 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 ZNF589Q86UQ0 364 aaPredicted RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 DGKHQ86XP1 1220 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 JAKMIP1Q96N16 626 aaKnown RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 TBC1D32Q96NH3 1257 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 MXD3Q9BW11 206 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 ZNF341Q9BYN7 854 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 TAF1DQ9H5J8 278 aaPredicted RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 KAT14Q9H8E8 782 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 KANSL2Q9H9L4 492 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 RRAGCQ9HB90 399 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 ARHGEF10LQ9HCE6 1279 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 PICK1Q9NRD5 415 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 SH2B1Q9NRF2 756 aaPredicted RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 PDRG1Q9NUG6 133 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 PNMA2Q9UL42 364 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 SYNPO2Q9UMS6 1093 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 MYH2Q9UKX2 1941 aa6.26□□□□□ -1.41
NEK4-205ENST00000493199 COL2A1P02458 1487 aaPredicted RBP6.26□□□□□ -1.41
NEK4-205ENST00000493199 ZNF541Q9H0D2 1346 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 DOCK2Q92608 1830 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 E7EWF7 191 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 CPLX1O14810 134 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 IFIT3O14879 490 aaKnown RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 ORC4O43929 436 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 CYP21A2P08686 494 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 XBP1P17861 261 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 EPS15P42566 896 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 USP14P54578 494 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 PTH1RQ03431 593 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 WTAPQ15007 396 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 ABCB5Q2M3G0 1257 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 NBPF9Q3BBW0 867 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 IFIT1BQ5T764 474 aaKnown RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 COL13A1Q5TAT6 717 aaPredicted RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 TMEM179Q6ZVK1 233 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 C16orf86Q6ZW13 317 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 CATIPQ7Z7H3 387 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 SKAP1Q86WV1 359 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 SMC1BQ8NDV3 1235 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 ALDH8A1Q9H2A2 487 aaPredicted RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 TCP11L1Q9NUJ3 509 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 GGA3Q9NZ52 723 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 RBM27Q9P2N5 1060 aaKnown RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 SAP30BPQ9UHR5 308 aaKnown RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 PALD1Q9ULE6 856 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 NAP1L2Q9ULW6 460 aaPredicted RBP6.25□□□□□ -1.41
NEK4-205ENST00000493199 STX8Q9UNK0 236 aa6.25□□□□□ -1.41
NEK4-205ENST00000493199 CTDP1Q9Y5B0 961 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms