RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 STOX1Q6ZVD7 989 aa8.26□□□□□ -1.09
HERC4-211ENST00000492996 GREM2Q9H772 168 aa8.26□□□□□ -1.09
HERC4-211ENST00000492996 HMG20BQ9P0W2 317 aa8.26□□□□□ -1.09
HERC4-211ENST00000492996 U3KPZ7 1027 aaPredicted RBP8.26□□□□□ -1.09
HERC4-211ENST00000492996 BRD2P25440 801 aaKnown RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 HAND2P61296 217 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 METTL24Q5JXM2 366 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 CCDC158Q5M9N0 1113 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 HELBQ8NG08 1087 aaPredicted RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 CNNM1Q9NRU3 951 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 TFIP11Q9UBB9 837 aaKnown RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 POLLQ9UGP5 575 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 C21orf2O43822 256 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 ITGA6P23229 1130 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 VEGFBP49765 207 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 RPS8P62241 208 aaKnown RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 ANKRD1Q15327 319 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 LBX2Q6XYB7 198 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 ATP6V1DQ9Y5K8 247 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 HSPA1AP0DMV8 641 aaKnown RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 HSPA1BP0DMV9 641 aaKnown RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 ZAP70P43403 619 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 CCT2P78371 535 aaKnown RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
HERC4-211ENST00000492996 SYAP1Q96A49 352 aaPredicted RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 ZNF830Q96NB3 372 aaPredicted RBP8.25□□□□□ -1.09
HERC4-211ENST00000492996 M0R2C6 588 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 SNAP23O00161 211 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 IRS4O14654 1257 aaPredicted RBP8.24□□□□□ -1.09
HERC4-211ENST00000492996 RNF113AO15541 343 aaKnown RBP8.24□□□□□ -1.09
HERC4-211ENST00000492996 HSPD1P10809 573 aaKnown RBP8.24□□□□□ -1.09
HERC4-211ENST00000492996 CCDC173Q0VFZ6 552 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 KRT32Q14532 448 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 GTF3C2Q8WUA4 911 aaPredicted RBP8.24□□□□□ -1.09
HERC4-211ENST00000492996 OSBP2Q969R2 916 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 MYH1P12882 1939 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 APOBRQ0VD83 1088 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 DEFB115Q30KQ5 88 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 SPDYE2Q495Y8 402 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 ZMYM1Q5SVZ6 1142 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 TBC1D22AQ8WUA7 517 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 RIPOR2Q9Y4F9 1068 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 IRF6O14896 467 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 HCLS1P14317 486 aaPredicted RBP8.24□□□□□ -1.09
HERC4-211ENST00000492996 LMOD1P29536 600 aaPredicted RBP8.24□□□□□ -1.09
HERC4-211ENST00000492996 ATP2B3Q16720 1220 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 IDI2Q9BXS1 227 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 TSPY26PQ9H489 355 aa8.24□□□□□ -1.09
HERC4-211ENST00000492996 MYH8P13535 1937 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 USP17L3A6NCW0 530 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 USP17L4A6NCW7 530 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 MANSC4A6NHS7 340 aaPredicted RBP8.23□□□□□ -1.09
HERC4-211ENST00000492996 USP17L1Q7RTZ2 530 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 RAB11FIP4Q86YS3 637 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 NCOA5Q9HCD5 579 aaKnown RBP8.23□□□□□ -1.09
HERC4-211ENST00000492996 GPHNQ9NQX3 736 aaPredicted RBP8.23□□□□□ -1.09
HERC4-211ENST00000492996 MINPP1Q9UNW1 487 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 AKAP2Q9Y2D5 859 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 ECE2O60344 883 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 UBE2HP62256 183 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 CEBPZQ03701 1054 aaKnown RBP8.23□□□□□ -1.09
HERC4-211ENST00000492996 TSGA10IPQ3SY00 556 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 SH3D19Q5HYK7 790 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 RGMBQ6NW40 437 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 GIMAP6Q6P9H5 292 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 ZDHHC15Q96MV8 337 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 HELLSQ9NRZ9 838 aa8.23□□□□□ -1.09
HERC4-211ENST00000492996 ANKRD18BA2A2Z9 1011 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 PLCB2Q00722 1185 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
HERC4-211ENST00000492996 TTC6Q86TZ1 520 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 JDP2Q8WYK2 163 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 TEPSINQ96N21 525 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 E7EWF7 191 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 H3BQV1 296 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 IDH1O75874 414 aaKnown RBP8.22□□□□□ -1.09
HERC4-211ENST00000492996 PDCP20941 246 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 SCRN1Q12765 414 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 SREBF2Q12772 1141 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 MOGSQ13724 837 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 DHX32Q7L7V1 743 aaKnown RBP8.22□□□□□ -1.09
HERC4-211ENST00000492996 FAM184AQ8NB25 1140 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 GTF3C6Q969F1 213 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 PPP1R9BQ96SB3 815 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 GGA1Q9UJY5 639 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 R3HCC1Q9Y3T6 440 aaKnown RBP8.22□□□□□ -1.09
HERC4-211ENST00000492996 FOXN1O15353 648 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 KRT85P78386 507 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
HERC4-211ENST00000492996 PUS7LQ9H0K6 701 aaKnown RBP8.22□□□□□ -1.09
HERC4-211ENST00000492996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.21□□□□□ -1.09
HERC4-211ENST00000492996 KCNA4P22459 653 aa8.21□□□□□ -1.09
HERC4-211ENST00000492996 MCAMP43121 646 aa8.21□□□□□ -1.09
HERC4-211ENST00000492996 GMPSP49915 693 aaPredicted RBP8.21□□□□□ -1.09
HERC4-211ENST00000492996 CAMK4Q16566 473 aa8.21□□□□□ -1.09
HERC4-211ENST00000492996 CCDC183Q5T5S1 534 aa8.21□□□□□ -1.09
HERC4-211ENST00000492996 TMEM87AQ8NBN3 555 aa8.21□□□□□ -1.09
HERC4-211ENST00000492996 DSCC1Q9BVC3 393 aa8.21□□□□□ -1.09
HERC4-211ENST00000492996 GOLGA6L4A6NEF3 574 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms