RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TMEM94Q12767 1356 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 KCNQ2O43526 872 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 APPP05067 770 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 ARL4DP49703 201 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 RPS26P62854 115 aaKnown RBP4.19□□□□□ -1.74
SNX13-209ENST00000492626 PKDCCQ504Y2 493 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 ANKRD24Q8TF21 1146 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 ZKSCAN3Q9BRR0 538 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 ABCB6Q9NP58 842 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 TBX22Q9Y458 520 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 MAP3K6O95382 1288 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 VEGFBP49765 207 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 FSTL1Q12841 308 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 DHX32Q7L7V1 743 aaKnown RBP4.19□□□□□ -1.74
SNX13-209ENST00000492626 LRP10Q7Z4F1 713 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 EMID1Q96A84 441 aaPredicted RBP4.19□□□□□ -1.74
SNX13-209ENST00000492626 ACSBG1Q96GR2 724 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 SALL4Q9UJQ4 1053 aa4.19□□□□□ -1.74
SNX13-209ENST00000492626 MRPL42Q9Y6G3 142 aaKnown RBP4.19□□□□□ -1.74
SNX13-209ENST00000492626 LOC102724428A0A0B4J2F2 783 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 AXIN1O15169 862 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 DNAJC6O75061 913 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CDC45O75419 566 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CELA3AP09093 270 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 SIK1P57059 783 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 FXNQ16595 210 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 PCNX4Q63HM2 1172 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 LARP1BQ659C4 914 aaKnown RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 C3orf58Q8NDZ4 430 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CLEC4MQ9H2X3 399 aaPredicted RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 RAB33AQ14088 237 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CTC1Q2NKJ3 1217 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CCDC84Q86UT8 332 aaPredicted RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 HOMER1Q86YM7 354 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CYP8B1Q9UNU6 501 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 PDZRN3Q9UPQ7 1066 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 PLEKHG1Q9ULL1 1385 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 SBNO2Q9Y2G9 1366 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 GRIN3BO60391 1043 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 DDAH1O94760 285 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 MAPTP10636 758 aaKnown RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 SPRED3Q2MJR0 410 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 CEP135Q66GS9 1140 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 LLGL2Q6P1M3 1020 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 NOL8Q76FK4 1167 aaKnown RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 C7orf43Q8WVR3 580 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 HNRNPLLQ8WVV9 542 aaKnown RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 APPBP2Q92624 585 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 EAF1Q96JC9 268 aaPredicted RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 IPO9Q96P70 1041 aaKnown RBP4.18□□□□□ -1.74
SNX13-209ENST00000492626 DZANK1Q9NVP4 752 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 PRKAB1Q9Y478 270 aa4.18□□□□□ -1.74
SNX13-209ENST00000492626 POTECB2RU33 542 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 ZNF157P51786 506 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 CCDC81Q6ZN84 652 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 GK5Q6ZS86 529 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 FILIP1Q7Z7B0 1213 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 GMCL1Q96IK5 515 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 NECAB3Q96P71 396 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 SPC25Q9HBM1 224 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 PICK1Q9NRD5 415 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 DHX29Q7Z478 1369 aaKnown RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 PRXQ9BXM0 1461 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 DHX57Q6P158 1386 aaKnown RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 SMAD7O15105 426 aaKnown RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 ETFBP38117 255 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 SOX9P48436 509 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 LRRFIP1Q32MZ4 808 aaKnown RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 FAM196AQ6ZSG2 479 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 PBX4Q9BYU1 374 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 GSX2Q9BZM3 304 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 ATXN7L1Q9ULK2 861 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 TLR6Q9Y2C9 796 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 BMP1P13497 986 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 CEBPAP49715 358 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 MLLT1Q03111 559 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 MPP2Q14168 576 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 HP1BP3Q5SSJ5 553 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 FBXL19Q6PCT2 694 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 ELMSAN1Q6PJG2 1045 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 AGMOQ6ZNB7 445 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 TMEM102Q8N9M5 508 aaPredicted RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 BSNDQ8WZ55 320 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 TRIM56Q9BRZ2 755 aaKnown RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 METTL14Q9HCE5 456 aaKnown RBP4.17□□□□□ -1.74
SNX13-209ENST00000492626 SEC31BQ9NQW1 1179 aa4.17□□□□□ -1.74
SNX13-209ENST00000492626 GPLD1P80108 840 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 MTERF2Q49AM1 385 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 JAZF1Q86VZ6 243 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 PRPF38AQ8NAV1 312 aaKnown RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 ZFP42Q96MM3 310 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 TCF12Q99081 682 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 NSFL1CQ9UNZ2 370 aaKnown RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 PARP4Q9UKK3 1724 aaKnown RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 TRPM1Q7Z4N2 1603 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 LRRIQ1Q96JM4 1722 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 SOS2Q07890 1332 aaPredicted RBP4.16□□□□□ -1.74
SNX13-209ENST00000492626 ITPKAP23677 461 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 PCDH1Q08174 1060 aa4.16□□□□□ -1.74
SNX13-209ENST00000492626 PEAR1Q5VY43 1037 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms