RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 LRRCC1Q9C099 1032 aa28.77■■■□□ 2.2
CTDSP1-211ENST00000492545 MAPKAPK5Q8IW41 473 aa28.76■■■□□ 2.19
CTDSP1-211ENST00000492545 NDUFB9Q9Y6M9 179 aa28.76■■■□□ 2.19
CTDSP1-211ENST00000492545 CAP2P40123 477 aa28.75■■■□□ 2.19
CTDSP1-211ENST00000492545 KIF22Q14807 665 aa28.75■■■□□ 2.19
CTDSP1-211ENST00000492545 SLC45A1Q9Y2W3 748 aa28.75■■■□□ 2.19
CTDSP1-211ENST00000492545 SLURP2P0DP57 97 aa28.74■■■□□ 2.19
CTDSP1-211ENST00000492545 ATP5JP18859 108 aa28.74■■■□□ 2.19
CTDSP1-211ENST00000492545 MLLT1Q03111 559 aaPredicted RBP28.74■■■□□ 2.19
CTDSP1-211ENST00000492545 PARK7Q99497 189 aaKnown RBP28.74■■■□□ 2.19
CTDSP1-211ENST00000492545 GINM1Q9NU53 330 aa28.74■■■□□ 2.19
CTDSP1-211ENST00000492545 PTPN22Q9Y2R2 807 aa28.74■■■□□ 2.19
CTDSP1-211ENST00000492545 GNRH1P01148 92 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 HLA-DOAP06340 250 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 DYNLL1P63167 89 aaKnown RBP28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 SLC9C2Q5TAH2 1124 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 GPAT2Q6NUI2 795 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 C17orf99Q6UX52 265 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 MIGA1Q8NAN2 632 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 TRIM34Q9BYJ4 488 aa28.73■■■□□ 2.19
CTDSP1-211ENST00000492545 FAM196BA6NMK8 535 aa28.72■■■□□ 2.19
CTDSP1-211ENST00000492545 USP5P45974 858 aa28.72■■■□□ 2.19
CTDSP1-211ENST00000492545 CRACR2BQ8N4Y2 399 aaPredicted RBP28.72■■■□□ 2.19
CTDSP1-211ENST00000492545 DCTPP1Q9H773 170 aa28.72■■■□□ 2.19
CTDSP1-211ENST00000492545 GOLIM4O00461 696 aa28.71■■■□□ 2.19
CTDSP1-211ENST00000492545 DNAJC2Q99543 621 aaKnown RBP28.71■■■□□ 2.19
CTDSP1-211ENST00000492545 PALD1Q9ULE6 856 aa28.71■■■□□ 2.19
CTDSP1-211ENST00000492545 TRIM75PA6NK02 468 aa28.7■■■□□ 2.18
CTDSP1-211ENST00000492545 ASNSP08243 561 aa28.7■■■□□ 2.18
CTDSP1-211ENST00000492545 PDE6AP16499 860 aa28.7■■■□□ 2.18
CTDSP1-211ENST00000492545 LACTBP83111 547 aaPredicted RBP28.7■■■□□ 2.18
CTDSP1-211ENST00000492545 ZNF280CQ8ND82 737 aa28.7■■■□□ 2.18
CTDSP1-211ENST00000492545 MAGEB6P1A0A0J9YX57 407 aa28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 USP17L5A8MUK1 530 aa28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 HAUS7Q99871 368 aa28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 RIOK1Q9BRS2 568 aaKnown RBP28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 BCL11AQ9H165 835 aa28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 AS3MTQ9HBK9 375 aa28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 PAG1Q9NWQ8 432 aa28.69■■■□□ 2.18
CTDSP1-211ENST00000492545 MYO5AQ9Y4I1 1855 aaKnown RBP28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 PRMT2P55345 433 aa28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 GADL1Q6ZQY3 521 aa28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 TTC6Q86TZ1 520 aa28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 PROCA1Q8NCQ7 364 aaPredicted RBP28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 BOLA2Q9H3K6 86 aa28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 DOCK1Q14185 1865 aa28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 ADGRA2Q96PE1 1338 aa28.68■■■□□ 2.18
CTDSP1-211ENST00000492545 RRP1P56182 461 aaKnown RBP28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 SPP2Q13103 211 aa28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 WDR18Q9BV38 432 aa28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 EHD4Q9H223 541 aa28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 SAP30BPQ9UHR5 308 aaKnown RBP28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 CPA4Q9UI42 421 aa28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 AGTPBP1Q9UPW5 1226 aa28.67■■■□□ 2.18
CTDSP1-211ENST00000492545 SOX10P56693 466 aa28.66■■■□□ 2.18
CTDSP1-211ENST00000492545 RRP1BQ14684 758 aaKnown RBP28.66■■■□□ 2.18
CTDSP1-211ENST00000492545 CRNKL1Q9BZJ0 848 aaKnown RBP28.66■■■□□ 2.18
CTDSP1-211ENST00000492545 ZNF532Q9HCE3 1301 aa28.66■■■□□ 2.18
CTDSP1-211ENST00000492545 CAP1Q01518 475 aa28.65■■■□□ 2.18
CTDSP1-211ENST00000492545 ARMC5Q96C12 935 aa28.65■■■□□ 2.18
CTDSP1-211ENST00000492545 DNAJC18Q9H819 358 aa28.65■■■□□ 2.18
CTDSP1-211ENST00000492545 SERPINB13Q9UIV8 391 aa28.65■■■□□ 2.18
CTDSP1-211ENST00000492545 PNMA3Q9UL41 463 aa28.65■■■□□ 2.18
CTDSP1-211ENST00000492545 HTTP42858 3142 aa28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 TCRBV5S4A2TA0A5A2 114 aa28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 HOXD10P28358 340 aa28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 PABPC4Q13310 644 aaKnown RBP eCLIP28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 GPATCH3Q96I76 525 aa28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 ECHDC1Q9NTX5 307 aa28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.64■■■□□ 2.18
CTDSP1-211ENST00000492545 CYP2C8P10632 490 aa28.63■■■□□ 2.17
CTDSP1-211ENST00000492545 BCRP11274 1271 aa28.63■■■□□ 2.17
CTDSP1-211ENST00000492545 SH3D19Q5HYK7 790 aa28.63■■■□□ 2.17
CTDSP1-211ENST00000492545 NBPF11Q86T75 865 aa28.63■■■□□ 2.17
CTDSP1-211ENST00000492545 CCDC84Q86UT8 332 aaPredicted RBP28.63■■■□□ 2.17
CTDSP1-211ENST00000492545 FOCADQ5VW36 1801 aa28.63■■■□□ 2.17
CTDSP1-211ENST00000492545 SMARCA5O60264 1052 aaPredicted RBP28.62■■■□□ 2.17
CTDSP1-211ENST00000492545 TATDN1Q6P1N9 297 aa28.62■■■□□ 2.17
CTDSP1-211ENST00000492545 TAOK2Q9UL54 1235 aa28.62■■■□□ 2.17
CTDSP1-211ENST00000492545 ADD2P35612 726 aa28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 PSMC4P43686 418 aa28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 ZSCAN25Q6NSZ9 544 aa28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 SMCR8Q8TEV9 937 aaPredicted RBP28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 EDC3Q96F86 508 aaKnown RBP28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 ARHGAP39Q9C0H5 1083 aa28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 PCDHB15Q9Y5E8 787 aa28.61■■■□□ 2.17
CTDSP1-211ENST00000492545 C19orf81C9J6K1 198 aa28.6■■■□□ 2.17
CTDSP1-211ENST00000492545 BACE1P56817 501 aa28.6■■■□□ 2.17
CTDSP1-211ENST00000492545 UBE3CQ15386 1083 aa28.6■■■□□ 2.17
CTDSP1-211ENST00000492545 ZBTB21Q9ULJ3 1066 aa28.6■■■□□ 2.17
CTDSP1-211ENST00000492545 PHIPQ8WWQ0 1821 aa28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 CDK5RAP2Q96SN8 1893 aa28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 POLR3DP05423 398 aaPredicted RBP28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 HMGCS2P54868 508 aa28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 SLC9C1Q4G0N8 1177 aa28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 YTHDC1Q96MU7 727 aaKnown RBP28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 PTCH2Q9Y6C5 1203 aa28.59■■■□□ 2.17
CTDSP1-211ENST00000492545 FMNL1O95466 1100 aaPredicted RBP28.58■■■□□ 2.17
CTDSP1-211ENST00000492545 OSBPP22059 807 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms