RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
GPNMB-213ENST00000492512 MROH7-TTC4A0A0A0MT08 1334 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 FAM196BA6NMK8 535 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 ZBTB22O15209 634 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 SYN1P17600 705 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
GPNMB-213ENST00000492512 C11orf49Q9H6J7 331 aa17.02■□□□□ 0.32
GPNMB-213ENST00000492512 MAGEA10P43363 369 aaPredicted RBP17.01■□□□□ 0.31
GPNMB-213ENST00000492512 HMGCS2P54868 508 aa17.01■□□□□ 0.31
GPNMB-213ENST00000492512 TRIM32Q13049 653 aa17.01■□□□□ 0.31
GPNMB-213ENST00000492512 LRIT3Q3SXY7 679 aa17.01■□□□□ 0.31
GPNMB-213ENST00000492512 Q7L0L9 218 aa17.01■□□□□ 0.31
GPNMB-213ENST00000492512 TBC1D2Q9BYX2 928 aa17.01■□□□□ 0.31
GPNMB-213ENST00000492512 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
GPNMB-213ENST00000492512 GJD2Q9UKL4 321 aa17.01■□□□□ 0.31
GPNMB-213ENST00000492512 PA2G4Q9UQ80 394 aaKnown RBP17.01■□□□□ 0.31
GPNMB-213ENST00000492512 PDS5AQ29RF7 1337 aaKnown RBP17■□□□□ 0.31
GPNMB-213ENST00000492512 RHBDL3P58872 404 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 MECOMQ03112 1051 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 ERICH6Q7L0X2 663 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 TDHQ8IZJ6 230 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 STXBP5LQ9Y2K9 1186 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 PLXNB2O15031 1838 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 UNC80Q8N2C7 3258 aa17■□□□□ 0.31
GPNMB-213ENST00000492512 ZNF521Q96K83 1311 aa16.99■□□□□ 0.31
GPNMB-213ENST00000492512 GPR75-ASB3A0A0A6YYF3 556 aa16.99■□□□□ 0.31
GPNMB-213ENST00000492512 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
GPNMB-213ENST00000492512 TIMM10P62072 90 aa16.99■□□□□ 0.31
GPNMB-213ENST00000492512 OGDHLQ9ULD0 1010 aa16.99■□□□□ 0.31
GPNMB-213ENST00000492512 USP17L5A8MUK1 530 aa16.98■□□□□ 0.31
GPNMB-213ENST00000492512 CAP2P40123 477 aa16.98■□□□□ 0.31
GPNMB-213ENST00000492512 TRIB2Q92519 343 aa16.98■□□□□ 0.31
GPNMB-213ENST00000492512 UBE2OQ9C0C9 1292 aaKnown RBP16.98■□□□□ 0.31
GPNMB-213ENST00000492512 AS3MTQ9HBK9 375 aa16.98■□□□□ 0.31
GPNMB-213ENST00000492512 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
GPNMB-213ENST00000492512 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
GPNMB-213ENST00000492512 LDHCP07864 332 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 PRKAR2AP13861 404 aaKnown RBP16.97■□□□□ 0.31
GPNMB-213ENST00000492512 CYP2B6P20813 491 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 IRX3P78415 501 aaPredicted RBP16.97■□□□□ 0.31
GPNMB-213ENST00000492512 GSTO1P78417 241 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
GPNMB-213ENST00000492512 SH3D19Q5HYK7 790 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 MTMR10Q9NXD2 777 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 MORF4L1Q9UBU8 362 aa16.97■□□□□ 0.31
GPNMB-213ENST00000492512 COL2A1P02458 1487 aaPredicted RBP16.97■□□□□ 0.31
GPNMB-213ENST00000492512 A0A1B0GUL7 405 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 E9PSI1 815 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 ALDH1L2Q3SY69 923 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 MAP3K21Q5TCX8 1036 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 ZNF384Q8TF68 577 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 XAGE2Q96GT9 111 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 SMC4Q9NTJ3 1288 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
GPNMB-213ENST00000492512 PFASO15067 1338 aa16.96■□□□□ 0.3
GPNMB-213ENST00000492512 LAMA2P24043 3122 aaKnown RBP16.95■□□□□ 0.3
GPNMB-213ENST00000492512 RRP1BQ14684 758 aaKnown RBP16.95■□□□□ 0.3
GPNMB-213ENST00000492512 SOCS4Q8WXH5 440 aa16.95■□□□□ 0.3
GPNMB-213ENST00000492512 TMOD4Q9NZQ9 345 aa16.95■□□□□ 0.3
GPNMB-213ENST00000492512 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
GPNMB-213ENST00000492512 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
GPNMB-213ENST00000492512 XRCC5P13010 732 aaKnown RBP16.94■□□□□ 0.3
GPNMB-213ENST00000492512 TFCP2Q12800 502 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 MTMR2Q13614 643 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 PDE3AQ14432 1141 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 TEX11Q8IYF3 940 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 TRMT44Q8IYL2 757 aaKnown RBP16.94■□□□□ 0.3
GPNMB-213ENST00000492512 GPRC5AQ8NFJ5 357 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 NSUN4Q96CB9 384 aaKnown RBP16.94■□□□□ 0.3
GPNMB-213ENST00000492512 NEUROD6Q96NK8 337 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 HMG20BQ9P0W2 317 aa16.94■□□□□ 0.3
GPNMB-213ENST00000492512 ZKSCAN1P17029 563 aaPredicted RBP16.93■□□□□ 0.3
GPNMB-213ENST00000492512 BACE1P56817 501 aa16.93■□□□□ 0.3
GPNMB-213ENST00000492512 HERVK_113P62684 666 aa16.93■□□□□ 0.3
GPNMB-213ENST00000492512 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
GPNMB-213ENST00000492512 TBC1D9Q6ZT07 1266 aa16.93■□□□□ 0.3
GPNMB-213ENST00000492512 CCAR1Q8IX12 1150 aaKnown RBP16.93■□□□□ 0.3
GPNMB-213ENST00000492512 SPATA5Q8NB90 893 aa16.93■□□□□ 0.3
GPNMB-213ENST00000492512 P2RX7Q99572 595 aaKnown RBP16.93■□□□□ 0.3
GPNMB-213ENST00000492512 WDR18Q9BV38 432 aa16.93■□□□□ 0.3
GPNMB-213ENST00000492512 PEX10O60683 326 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 ASNSP08243 561 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 COL6A1P12109 1028 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 MAPK4P31152 587 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
GPNMB-213ENST00000492512 CACNB2Q08289 660 aaPredicted RBP16.92■□□□□ 0.3
GPNMB-213ENST00000492512 PI16Q6UXB8 463 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 NOL10Q9BSC4 688 aaKnown RBP16.92■□□□□ 0.3
GPNMB-213ENST00000492512 TXNRD2Q9NNW7 524 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 PI4KBQ9UBF8 816 aa16.92■□□□□ 0.3
GPNMB-213ENST00000492512 SIPA1L1O43166 1804 aa16.91■□□□□ 0.3
GPNMB-213ENST00000492512 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
GPNMB-213ENST00000492512 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
GPNMB-213ENST00000492512 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
GPNMB-213ENST00000492512 MEIS3Q99687 375 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms