RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 DNAJC18Q9H819 358 aa21.41■■□□□ 1.02
LMNB1-206ENST00000492190 RNF186Q9NXI6 227 aa21.41■■□□□ 1.02
LMNB1-206ENST00000492190 PRKAB2O43741 272 aa21.4■■□□□ 1.02
LMNB1-206ENST00000492190 CTCFP49711 727 aaPredicted RBP21.4■■□□□ 1.02
LMNB1-206ENST00000492190 METTL16Q86W50 562 aaKnown RBP21.4■■□□□ 1.02
LMNB1-206ENST00000492190 ERO1BQ86YB8 467 aa21.4■■□□□ 1.02
LMNB1-206ENST00000492190 PLEKHM2Q8IWE5 1019 aa21.4■■□□□ 1.02
LMNB1-206ENST00000492190 REM2Q8IYK8 340 aaPredicted RBP21.4■■□□□ 1.02
LMNB1-206ENST00000492190 MS4A4AQ96JQ5 239 aa21.4■■□□□ 1.02
LMNB1-206ENST00000492190 BEGAINQ9BUH8 593 aa21.4■■□□□ 1.02
LMNB1-206ENST00000492190 PI4KBQ9UBF8 816 aa21.4■■□□□ 1.02
LMNB1-206ENST00000492190 RNF113AO15541 343 aaKnown RBP21.39■■□□□ 1.01
LMNB1-206ENST00000492190 TRPA1O75762 1119 aa21.39■■□□□ 1.01
LMNB1-206ENST00000492190 LBX1P52954 281 aa21.39■■□□□ 1.01
LMNB1-206ENST00000492190 EVX2Q03828 476 aa21.39■■□□□ 1.01
LMNB1-206ENST00000492190 ZSCAN25Q6NSZ9 544 aa21.39■■□□□ 1.01
LMNB1-206ENST00000492190 SDR42E1Q8WUS8 393 aa21.39■■□□□ 1.01
LMNB1-206ENST00000492190 OSBP2Q969R2 916 aa21.39■■□□□ 1.01
LMNB1-206ENST00000492190 CRNKL1Q9BZJ0 848 aaKnown RBP21.39■■□□□ 1.01
LMNB1-206ENST00000492190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.39■■□□□ 1.01
LMNB1-206ENST00000492190 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.39■■□□□ 1.01
LMNB1-206ENST00000492190 MANSC4A6NHS7 340 aaPredicted RBP21.38■■□□□ 1.01
LMNB1-206ENST00000492190 IGF2BP3O00425 579 aaKnown RBP eCLIP21.38■■□□□ 1.01
LMNB1-206ENST00000492190 SCYL3Q8IZE3 742 aa21.38■■□□□ 1.01
LMNB1-206ENST00000492190 PTPN18Q99952 460 aa21.38■■□□□ 1.01
LMNB1-206ENST00000492190 TESPA1A2RU30 521 aaPredicted RBP21.37■■□□□ 1.01
LMNB1-206ENST00000492190 IRF6O14896 467 aa21.37■■□□□ 1.01
LMNB1-206ENST00000492190 CA12O43570 354 aa21.37■■□□□ 1.01
LMNB1-206ENST00000492190 PDE4AP27815 886 aa21.37■■□□□ 1.01
LMNB1-206ENST00000492190 SREBF2Q12772 1141 aa21.37■■□□□ 1.01
LMNB1-206ENST00000492190 PPIL2Q13356 520 aa21.37■■□□□ 1.01
LMNB1-206ENST00000492190 DCP1AQ9NPI6 582 aaPredicted RBP21.37■■□□□ 1.01
LMNB1-206ENST00000492190 HERC5Q9UII4 1024 aaKnown RBP21.37■■□□□ 1.01
LMNB1-206ENST00000492190 CTNND1O60716 968 aaKnown RBP21.36■■□□□ 1.01
LMNB1-206ENST00000492190 PLCD1P51178 756 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 JAG1P78504 1218 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 PPATQ06203 517 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 CCDC84Q86UT8 332 aaPredicted RBP21.36■■□□□ 1.01
LMNB1-206ENST00000492190 IFNL1Q8IU54 200 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
LMNB1-206ENST00000492190 BRI3BPQ8WY22 251 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 APPBP2Q92624 585 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 FSD1Q9BTV5 496 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 OSBPL3Q9H4L5 887 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 SAGE1Q9NXZ1 904 aa21.36■■□□□ 1.01
LMNB1-206ENST00000492190 M0R2C6 588 aa21.35■■□□□ 1.01
LMNB1-206ENST00000492190 ZFYP08048 801 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-206ENST00000492190 PTPRAP18433 802 aa21.35■■□□□ 1.01
LMNB1-206ENST00000492190 SHROOM1Q2M3G4 852 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-206ENST00000492190 COL13A1Q5TAT6 717 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-206ENST00000492190 STRBPQ96SI9 672 aaKnown RBP21.35■■□□□ 1.01
LMNB1-206ENST00000492190 SEC62Q99442 399 aaKnown RBP21.35■■□□□ 1.01
LMNB1-206ENST00000492190 R3HDMLQ9H3Y0 253 aa21.35■■□□□ 1.01
LMNB1-206ENST00000492190 SMIM22K7EJ46 135 aa21.34■■□□□ 1.01
LMNB1-206ENST00000492190 CYP2D6P10635 497 aa21.34■■□□□ 1.01
LMNB1-206ENST00000492190 INHBEP58166 350 aa21.34■■□□□ 1.01
LMNB1-206ENST00000492190 PRDM10Q9NQV6 1147 aa21.34■■□□□ 1.01
LMNB1-206ENST00000492190 MCM9Q9NXL9 1143 aa21.34■■□□□ 1.01
LMNB1-206ENST00000492190 KCNH4Q9UQ05 1017 aa21.34■■□□□ 1.01
LMNB1-206ENST00000492190 CCL15-CCL14A0A0B4J2E2 113 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 HLA-DOAP06340 250 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 CAP2P40123 477 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 GTF2A2P52657 109 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 CCL15Q16663 113 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 ZMYM1Q5SVZ6 1142 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 CRACR2BQ8N4Y2 399 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-206ENST00000492190 EVI5LQ96CN4 794 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 EHD4Q9H223 541 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 SLC4A4Q9Y6R1 1079 aa21.33■■□□□ 1.01
LMNB1-206ENST00000492190 TBC1D8O95759 1140 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 MOGSQ13724 837 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 TTC6Q86TZ1 520 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 PICK1Q9NRD5 415 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 ATP8A2Q9NTI2 1148 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 SERPINB13Q9UIV8 391 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 ZHX2Q9Y6X8 837 aa21.32■■□□□ 1
LMNB1-206ENST00000492190 CYP2D7A0A087X1C5 515 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 GSG1L2A8MUP6 293 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 GPAA1O43292 621 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 POLR3DP05423 398 aaPredicted RBP21.31■■□□□ 1
LMNB1-206ENST00000492190 GABPAQ06546 454 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 SNAPC2Q13487 334 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 FAM43AQ8N2R8 423 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 AFG3L2Q9Y4W6 797 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 LOC285556D6RIA3 1793 aa21.31■■□□□ 1
LMNB1-206ENST00000492190 GDF11O95390 407 aa21.3■■□□□ 1
LMNB1-206ENST00000492190 SHMT1P34896 483 aa21.3■■□□□ 1
LMNB1-206ENST00000492190 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
LMNB1-206ENST00000492190 CFHR5Q9BXR6 569 aa21.3■■□□□ 1
LMNB1-206ENST00000492190 BTBD19C9JJ37 291 aa21.29■■□□□ 1
LMNB1-206ENST00000492190 USP17L12C9JPN9 530 aa21.29■■□□□ 1
LMNB1-206ENST00000492190 USP17L21D6R901 530 aa21.29■■□□□ 1
LMNB1-206ENST00000492190 CETPP11597 493 aa21.29■■□□□ 1
LMNB1-206ENST00000492190 LRRFIP1Q32MZ4 808 aaKnown RBP21.29■■□□□ 1
LMNB1-206ENST00000492190 TRIM34Q9BYJ4 488 aa21.29■■□□□ 1
LMNB1-206ENST00000492190 EPB41L4AQ9HCS5 686 aaPredicted RBP21.29■■□□□ 1
LMNB1-206ENST00000492190 TRIM6-TRIM34B2RNG4 842 aa21.28■■□□□ 1
LMNB1-206ENST00000492190 CXCL11O14625 94 aa21.28■■□□□ 1
LMNB1-206ENST00000492190 C12orf60Q5U649 245 aa21.28■■□□□ 1
LMNB1-206ENST00000492190 CTR9Q6PD62 1173 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms