RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 V9GY48 417 aaPredicted RBP14.64□□□□□ -0.07
COL6A3-212ENST00000491769 F13A1P00488 732 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 HOXC9P31274 260 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 MAN1A1P33908 653 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 ESYT2A0FGR8 921 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 FAM170AA1A519 330 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 TNNI1P19237 187 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 DNAJC21Q5F1R6 531 aaKnown RBP14.64□□□□□ -0.07
COL6A3-212ENST00000491769 BSPRYQ5W0U4 402 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 CCDC110Q8TBZ0 833 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 TSGA10Q9BZW7 698 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 DNM3Q9UQ16 869 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 KDM5BQ9UGL1 1544 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 UVSSAQ2YD98 709 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 ZNF365Q70YC5 407 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 ABT1Q9ULW3 272 aaKnown RBP14.64□□□□□ -0.07
COL6A3-212ENST00000491769 TTF2Q9UNY4 1162 aaKnown RBP14.64□□□□□ -0.07
COL6A3-212ENST00000491769 TSTA3Q13630 321 aaPredicted RBP14.64□□□□□ -0.07
COL6A3-212ENST00000491769 ZSCAN23Q3MJ62 389 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 RSPH3Q86UC2 560 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 XAGE2Q96GT9 111 aa14.64□□□□□ -0.07
COL6A3-212ENST00000491769 YTHDC2Q9H6S0 1430 aaKnown RBP14.64□□□□□ -0.07
COL6A3-212ENST00000491769 IGBP1P78318 339 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 PLBD2Q8NHP8 589 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 EXOC3O60645 756 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 ALAS1P13196 640 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 PSMD6Q15008 389 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 ST7Q9NRC1 585 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 MAPK8IP1Q9UQF2 711 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 RNASE9P60153 205 aaKnown RBP14.63□□□□□ -0.07
COL6A3-212ENST00000491769 SETDB1Q15047 1291 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 FAM102BQ5T8I3 360 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 ANKRD44Q8N8A2 993 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 HELLSQ9NRZ9 838 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 PAXBP1Q9Y5B6 917 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 STK24Q9Y6E0 443 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 CTDSPL2Q05D32 466 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 OTUD6AQ7L8S5 288 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 BRAPQ7Z569 592 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 SRGAP1Q7Z6B7 1085 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 MRPL44Q9H9J2 332 aaKnown RBP14.63□□□□□ -0.07
COL6A3-212ENST00000491769 KCNA6P17658 529 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 ABI1Q8IZP0 508 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 CAPN9O14815 690 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 DOK7Q18PE1 504 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 CPLX4Q7Z7G2 160 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 NKIRAS1Q9NYS0 192 aa14.63□□□□□ -0.07
COL6A3-212ENST00000491769 ERCC3P19447 782 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 DYMQ7RTS9 669 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 TPH2Q8IWU9 490 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 ANKRD35Q8N283 1001 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 MMS19Q96T76 1030 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 DISP3Q9P2K9 1392 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 VWA3BQ502W6 1294 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 CCDC26Q8TAB7 109 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 DDX17Q92841 729 aaKnown RBP14.62□□□□□ -0.07
COL6A3-212ENST00000491769 EYA1Q99502 592 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 LRFN2Q9ULH4 789 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 PTPN23Q9H3S7 1636 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 DEXIO95424 95 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 SLC12A2P55011 1212 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 ERCC6LQ2NKX8 1250 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 DPP9Q86TI2 863 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 CETN3O15182 167 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 ARID4AP29374 1257 aaPredicted RBP14.62□□□□□ -0.07
COL6A3-212ENST00000491769 RILPL1Q5EBL4 403 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 ARHGAP45Q92619 1136 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 ARFGAP3Q9NP61 516 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 IRAK4Q9NWZ3 460 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 CIB2O75838 187 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 CCDC186Q7Z3E2 898 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 MIER3Q7Z3K6 550 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 CERS3Q8IU89 383 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 IP6K1Q92551 441 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 TEKT1Q969V4 418 aa14.62□□□□□ -0.07
COL6A3-212ENST00000491769 WDR97A6NE52 1622 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 RHOXF2BP0C7M4 288 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 GPIHBP1Q8IV16 184 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 RHOXF2Q9BQY4 288 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 EYA2O00167 538 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 ZEB2O60315 1214 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 AK2P54819 239 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 DIXDC1Q155Q3 683 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 CALCRLQ16602 461 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 CCDC121Q6ZUS5 278 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 UBL4BQ8N7F7 174 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 KIF9Q9HAQ2 790 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
COL6A3-212ENST00000491769 IGHDP01880 384 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 A1BGP04217 495 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 GPATCH11Q8N954 259 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 KRT24Q2M2I5 525 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 HERC4Q5GLZ8 1057 aaPredicted RBP14.61□□□□□ -0.07
COL6A3-212ENST00000491769 CCDC122Q5T0U0 273 aa14.61□□□□□ -0.07
COL6A3-212ENST00000491769 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
COL6A3-212ENST00000491769 APOL6Q9BWW8 343 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms