RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 FAM46AQ96IP4 442 aaKnown RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 UBL7Q96S82 380 aaPredicted RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 LRRC3Q9BY71 257 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 CRIM1Q9NZV1 1036 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 ACTL7BQ9Y614 415 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 PRAMEF27A3QJZ7 478 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 DCDC2CA8MYV0 355 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 SART1O43290 800 aaKnown RBP6.49□□□□□ -1.37
RTN4-215ENST00000491592 SMARCA5O60264 1052 aaPredicted RBP6.49□□□□□ -1.37
RTN4-215ENST00000491592 GREM1O60565 184 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 CRKP46108 304 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 CDK8P49336 464 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 ERVK-24P63145 666 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 MPP2Q14168 576 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 INPP5AQ14642 412 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 DZIP1LQ8IYY4 767 aaKnown RBP6.49□□□□□ -1.37
RTN4-215ENST00000491592 FBXO27Q8NI29 283 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 DRC1Q96MC2 740 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 TINF2Q9BSI4 451 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 ATXN3LQ9H3M9 355 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 UBP1Q9NZI7 540 aa6.49□□□□□ -1.37
RTN4-215ENST00000491592 TLR3O15455 904 aaKnown RBP6.48□□□□□ -1.37
RTN4-215ENST00000491592 GJA8P48165 433 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 TNNI2P48788 182 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 APOBRQ0VD83 1088 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 DYMQ7RTS9 669 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 HDXQ7Z353 690 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 REC114Q7Z4M0 266 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 UTP4Q969X6 686 aaKnown RBP6.48□□□□□ -1.37
RTN4-215ENST00000491592 GPRASP2Q96D09 838 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 EAF1Q96JC9 268 aaPredicted RBP6.48□□□□□ -1.37
RTN4-215ENST00000491592 MYRFLQ96LU7 910 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 NT5C1AQ9BXI3 368 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 GSX1Q9H4S2 264 aaPredicted RBP6.48□□□□□ -1.37
RTN4-215ENST00000491592 FAM105AQ9NUU6 356 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 INPP5FQ9Y2H2 1132 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 HIF3AQ9Y2N7 669 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 CSADQ9Y600 493 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 SNCAIPQ9Y6H5 919 aa6.48□□□□□ -1.37
RTN4-215ENST00000491592 CADPSQ9ULU8 1353 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 RAB6AP20340 208 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 ZC3H6P61129 1189 aaKnown RBP6.47□□□□□ -1.37
RTN4-215ENST00000491592 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 CWF19L2Q2TBE0 894 aaKnown RBP6.47□□□□□ -1.37
RTN4-215ENST00000491592 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 CYFIP1Q7L576 1253 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 ARMC10Q8N2F6 343 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 PIDD1Q9HB75 910 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 PICK1Q9NRD5 415 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 DISC1Q9NRI5 854 aa6.47□□□□□ -1.37
RTN4-215ENST00000491592 ROBO2Q9HCK4 1378 aa6.46□□□□□ -1.37
RTN4-215ENST00000491592 NEFMP07197 916 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 HCLS1P14317 486 aaPredicted RBP6.46□□□□□ -1.38
RTN4-215ENST00000491592 NTF4P34130 210 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 ASPAP45381 313 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 SGO2Q562F6 1265 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 ZBTB37Q5TC79 503 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 PRR23CQ6ZRP0 262 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 NOL8Q76FK4 1167 aaKnown RBP6.46□□□□□ -1.38
RTN4-215ENST00000491592 C12orf40Q86WS4 652 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 RASGRP4Q8TDF6 673 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 CAPN10Q9HC96 672 aa6.46□□□□□ -1.38
RTN4-215ENST00000491592 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.45□□□□□ -1.38
RTN4-215ENST00000491592 PLEKHD1A6NEE1 506 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 BTBD11A6QL63 1104 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 GFRA2O00451 464 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 SETQ01105 290 aaPredicted RBP6.45□□□□□ -1.38
RTN4-215ENST00000491592 RING1Q06587 406 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 SEZ6Q53EL9 994 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 FAM20CQ8IXL6 584 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 RNF214Q8ND24 703 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
RTN4-215ENST00000491592 NKD1Q969G9 470 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 C8orf37Q96NL8 207 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 YIPF2Q9BWQ6 316 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 ACSS3Q9H6R3 686 aa6.45□□□□□ -1.38
RTN4-215ENST00000491592 POLR3KQ9Y2Y1 108 aaPredicted RBP6.45□□□□□ -1.38
RTN4-215ENST00000491592 FANCGO15287 622 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 DHX15O43143 795 aaKnown RBP6.44□□□□□ -1.38
RTN4-215ENST00000491592 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 BMP3P12645 472 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 USP11P51784 963 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 GNL2Q13823 731 aaKnown RBP6.44□□□□□ -1.38
RTN4-215ENST00000491592 NAALADL2Q58DX5 795 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 SLITRK4Q8IW52 837 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 SREK1Q8WXA9 508 aaKnown RBP6.44□□□□□ -1.38
RTN4-215ENST00000491592 ISL2Q96A47 359 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 GOLGA2P5Q9HBQ8 144 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 PCMTD2Q9NV79 361 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 TACC3Q9Y6A5 838 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 ABCC9O60706 1549 aa6.44□□□□□ -1.38
RTN4-215ENST00000491592 ANKRD62A6NC57 917 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 RNGTTO60942 597 aaKnown RBP6.43□□□□□ -1.38
RTN4-215ENST00000491592 MAP4P27816 1152 aaKnown RBP6.43□□□□□ -1.38
RTN4-215ENST00000491592 RXRBP28702 533 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 GRK4P32298 578 aa6.43□□□□□ -1.38
RTN4-215ENST00000491592 ETF1P62495 437 aaKnown RBP6.43□□□□□ -1.38
RTN4-215ENST00000491592 PDE4BQ07343 736 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms