RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 CAP1Q01518 475 aa16.52■□□□□ 0.24
CDK9-204ENST00000491521 ADGRA1Q86SQ6 560 aa16.52■□□□□ 0.24
CDK9-204ENST00000491521 CCDC84Q86UT8 332 aaPredicted RBP16.52■□□□□ 0.24
CDK9-204ENST00000491521 PLEKHM2Q8IWE5 1019 aa16.52■□□□□ 0.24
CDK9-204ENST00000491521 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
CDK9-204ENST00000491521 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.52■□□□□ 0.24
CDK9-204ENST00000491521 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
CDK9-204ENST00000491521 ZSWIM8A7E2V4 1837 aa16.52■□□□□ 0.23
CDK9-204ENST00000491521 DOCK1Q14185 1865 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 PDHXO00330 501 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 IDH1O75874 414 aaKnown RBP16.51■□□□□ 0.23
CDK9-204ENST00000491521 BAG3O95817 575 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 PDE1AP54750 535 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
CDK9-204ENST00000491521 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 KCNH4Q9UQ05 1017 aa16.51■□□□□ 0.23
CDK9-204ENST00000491521 TRIM75PA6NK02 468 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 PTPRAP18433 802 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 CYP7A1P22680 504 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 SLC4A8Q2Y0W8 1093 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 TSHZ3Q63HK5 1081 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 TGFBRAP1Q8WUH2 860 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 ZNF512BQ96KM6 892 aaPredicted RBP16.5■□□□□ 0.23
CDK9-204ENST00000491521 CPA4Q9UI42 421 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
CDK9-204ENST00000491521 ERC2O15083 957 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 TLR2O60603 784 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 CTNND1O60716 968 aaKnown RBP16.49■□□□□ 0.23
CDK9-204ENST00000491521 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
CDK9-204ENST00000491521 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
CDK9-204ENST00000491521 ANKRD23Q86SG2 305 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 MIGA1Q8NAN2 632 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 CDK5RAP2Q96SN8 1893 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 ARHGAP39Q9C0H5 1083 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 STAP2Q9UGK3 403 aa16.49■□□□□ 0.23
CDK9-204ENST00000491521 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
CDK9-204ENST00000491521 TTC41PQ6P2S7 1318 aa16.48■□□□□ 0.23
CDK9-204ENST00000491521 PLCG2P16885 1265 aa16.48■□□□□ 0.23
CDK9-204ENST00000491521 MOGSQ13724 837 aa16.48■□□□□ 0.23
CDK9-204ENST00000491521 KIF22Q14807 665 aa16.48■□□□□ 0.23
CDK9-204ENST00000491521 MAGEB6Q8N7X4 407 aa16.48■□□□□ 0.23
CDK9-204ENST00000491521 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
CDK9-204ENST00000491521 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
CDK9-204ENST00000491521 SALL3Q9BXA9 1300 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 CXCL11O14625 94 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
CDK9-204ENST00000491521 GLRX3O76003 335 aaKnown RBP16.47■□□□□ 0.23
CDK9-204ENST00000491521 CYP2C8P10632 490 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 ARHGEF6Q15052 776 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 GPAT2Q6NUI2 795 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 TRIM34Q9BYJ4 488 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 BOLA2Q9H3K6 86 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 OSBPL3Q9H4L5 887 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
CDK9-204ENST00000491521 FLT1P17948 1338 aa16.46■□□□□ 0.23
CDK9-204ENST00000491521 A0A0G2JLL6 359 aaPredicted RBP16.46■□□□□ 0.23
CDK9-204ENST00000491521 TBC1D12O60347 775 aa16.46■□□□□ 0.23
CDK9-204ENST00000491521 MYCP01106 439 aaPredicted RBP16.46■□□□□ 0.23
CDK9-204ENST00000491521 ATP5JP18859 108 aa16.46■□□□□ 0.23
CDK9-204ENST00000491521 LACTBP83111 547 aaPredicted RBP16.46■□□□□ 0.23
CDK9-204ENST00000491521 PRRT2Q7Z6L0 340 aaPredicted RBP16.46■□□□□ 0.23
CDK9-204ENST00000491521 PARK7Q99497 189 aaKnown RBP16.46■□□□□ 0.23
CDK9-204ENST00000491521 DNAJC2Q99543 621 aaKnown RBP16.46■□□□□ 0.23
CDK9-204ENST00000491521 PALD1Q9ULE6 856 aa16.46■□□□□ 0.23
CDK9-204ENST00000491521 PTCH2Q9Y6C5 1203 aa16.46■□□□□ 0.23
CDK9-204ENST00000491521 PTPRFP10586 1907 aa16.46■□□□□ 0.23
CDK9-204ENST00000491521 FOCADQ5VW36 1801 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 PPP4CP60510 307 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 MAP3K12Q12852 859 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 RRP1BQ14684 758 aaKnown RBP16.45■□□□□ 0.22
CDK9-204ENST00000491521 C17orf99Q6UX52 265 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
CDK9-204ENST00000491521 CRACR2BQ8N4Y2 399 aaPredicted RBP16.45■□□□□ 0.22
CDK9-204ENST00000491521 COL2A1P02458 1487 aaPredicted RBP16.45■□□□□ 0.22
CDK9-204ENST00000491521 PDE4DIPQ5VU43 2346 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 SIPA1L1O43166 1804 aa16.45■□□□□ 0.22
CDK9-204ENST00000491521 BRCA2P51587 3418 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
CDK9-204ENST00000491521 PSMC4P43686 418 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 USP5P45974 858 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 TTC22Q5TAA0 569 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 PI4K2BQ8TCG2 481 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 DHX36Q9H2U1 1008 aaKnown RBP16.44■□□□□ 0.22
CDK9-204ENST00000491521 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
CDK9-204ENST00000491521 MYH1P12882 1939 aa16.43■□□□□ 0.22
CDK9-204ENST00000491521 GOLIM4O00461 696 aa16.43■□□□□ 0.22
CDK9-204ENST00000491521 GDF11O95390 407 aa16.43■□□□□ 0.22
CDK9-204ENST00000491521 CAP2P40123 477 aa16.43■□□□□ 0.22
CDK9-204ENST00000491521 SPP2Q13103 211 aa16.43■□□□□ 0.22
CDK9-204ENST00000491521 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
CDK9-204ENST00000491521 MKI67P46013 3256 aaKnown RBP16.43■□□□□ 0.22
CDK9-204ENST00000491521 KIAA0100Q14667 2235 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms