RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CPA4Q9UI42 421 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 ADGRA2Q96PE1 1338 aa21.98■■□□□ 1.11
HMGN1-219ENST00000491183 SIPA1L1O43166 1804 aa21.97■■□□□ 1.11
HMGN1-219ENST00000491183 FOCADQ5VW36 1801 aa21.97■■□□□ 1.11
HMGN1-219ENST00000491183 LACTBP83111 547 aaPredicted RBP21.97■■□□□ 1.11
HMGN1-219ENST00000491183 MAPKAPK5Q8IW41 473 aa21.97■■□□□ 1.11
HMGN1-219ENST00000491183 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
HMGN1-219ENST00000491183 PI4KBQ9UBF8 816 aa21.97■■□□□ 1.11
HMGN1-219ENST00000491183 PTPRFP10586 1907 aa21.97■■□□□ 1.11
HMGN1-219ENST00000491183 FASTKD5Q7L8L6 764 aaKnown RBP21.96■■□□□ 1.11
HMGN1-219ENST00000491183 CLASRPQ8N2M8 674 aaKnown RBP21.96■■□□□ 1.11
HMGN1-219ENST00000491183 MAGEB6Q8N7X4 407 aa21.96■■□□□ 1.11
HMGN1-219ENST00000491183 DHX36Q9H2U1 1008 aaKnown RBP21.96■■□□□ 1.11
HMGN1-219ENST00000491183 FLT1P17948 1338 aa21.96■■□□□ 1.11
HMGN1-219ENST00000491183 RAB11FIP3O75154 756 aa21.95■■□□□ 1.1
HMGN1-219ENST00000491183 CTGFP29279 349 aa21.95■■□□□ 1.1
HMGN1-219ENST00000491183 CAP2P40123 477 aa21.95■■□□□ 1.1
HMGN1-219ENST00000491183 ARHGEF6Q15052 776 aa21.95■■□□□ 1.1
HMGN1-219ENST00000491183 HERC5Q9UII4 1024 aaKnown RBP21.95■■□□□ 1.1
HMGN1-219ENST00000491183 HTTP42858 3142 aa21.95■■□□□ 1.1
HMGN1-219ENST00000491183 ATAD5Q96QE3 1844 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 TRIM75PA6NK02 468 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 CYP2C8P10632 490 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 GADL1Q6ZQY3 521 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 METTL16Q86W50 562 aaKnown RBP21.94■■□□□ 1.1
HMGN1-219ENST00000491183 MIGA1Q8NAN2 632 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 PALD1Q9ULE6 856 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 PTCH2Q9Y6C5 1203 aa21.94■■□□□ 1.1
HMGN1-219ENST00000491183 ECM2O94769 699 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-219ENST00000491183 MAP3K12Q12852 859 aa21.93■■□□□ 1.1
HMGN1-219ENST00000491183 KIF22Q14807 665 aa21.93■■□□□ 1.1
HMGN1-219ENST00000491183 FOXP4Q8IVH2 680 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-219ENST00000491183 ARMC5Q96C12 935 aa21.93■■□□□ 1.1
HMGN1-219ENST00000491183 BCL11AQ9H165 835 aa21.93■■□□□ 1.1
HMGN1-219ENST00000491183 DNAJC18Q9H819 358 aa21.93■■□□□ 1.1
HMGN1-219ENST00000491183 IFIT2P09913 472 aaKnown RBP21.92■■□□□ 1.1
HMGN1-219ENST00000491183 BCRP11274 1271 aa21.92■■□□□ 1.1
HMGN1-219ENST00000491183 JAG1P78504 1218 aa21.92■■□□□ 1.1
HMGN1-219ENST00000491183 SPP2Q13103 211 aa21.92■■□□□ 1.1
HMGN1-219ENST00000491183 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.92■■□□□ 1.1
HMGN1-219ENST00000491183 SAP30BPQ9UHR5 308 aaKnown RBP21.92■■□□□ 1.1
HMGN1-219ENST00000491183 PARK7Q99497 189 aaKnown RBP21.91■■□□□ 1.1
HMGN1-219ENST00000491183 SLC45A1Q9Y2W3 748 aa21.91■■□□□ 1.1
HMGN1-219ENST00000491183 TNRC18O15417 2968 aaPredicted RBP21.91■■□□□ 1.1
HMGN1-219ENST00000491183 POTEFA5A3E0 1075 aa21.9■■□□□ 1.1
HMGN1-219ENST00000491183 PSMC4P43686 418 aa21.9■■□□□ 1.1
HMGN1-219ENST00000491183 TTF1Q15361 905 aaPredicted RBP21.9■■□□□ 1.1
HMGN1-219ENST00000491183 ZNF280CQ8ND82 737 aa21.9■■□□□ 1.1
HMGN1-219ENST00000491183 TRIM47Q96LD4 638 aa21.9■■□□□ 1.1
HMGN1-219ENST00000491183 MYH1P12882 1939 aa21.9■■□□□ 1.1
HMGN1-219ENST00000491183 USP17L5A8MUK1 530 aa21.89■■□□□ 1.09
HMGN1-219ENST00000491183 GNRH1P01148 92 aa21.89■■□□□ 1.09
HMGN1-219ENST00000491183 SHROOM1Q2M3G4 852 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-219ENST00000491183 SLC4A8Q2Y0W8 1093 aa21.89■■□□□ 1.09
HMGN1-219ENST00000491183 TREML2Q5T2D2 321 aa21.89■■□□□ 1.09
HMGN1-219ENST00000491183 TMED8Q6PL24 325 aaPredicted RBP21.89■■□□□ 1.09
HMGN1-219ENST00000491183 EDC3Q96F86 508 aaKnown RBP21.89■■□□□ 1.09
HMGN1-219ENST00000491183 RIOK1Q9BRS2 568 aaKnown RBP21.89■■□□□ 1.09
HMGN1-219ENST00000491183 AGTPBP1Q9UPW5 1226 aa21.89■■□□□ 1.09
HMGN1-219ENST00000491183 GOLIM4O00461 696 aa21.88■■□□□ 1.09
HMGN1-219ENST00000491183 USP5P45974 858 aa21.88■■□□□ 1.09
HMGN1-219ENST00000491183 CERS3Q8IU89 383 aa21.88■■□□□ 1.09
HMGN1-219ENST00000491183 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
HMGN1-219ENST00000491183 ZNF333Q96JL9 665 aa21.88■■□□□ 1.09
HMGN1-219ENST00000491183 DNAJC2Q99543 621 aaKnown RBP21.88■■□□□ 1.09
HMGN1-219ENST00000491183 TBC1D2Q9BYX2 928 aa21.88■■□□□ 1.09
HMGN1-219ENST00000491183 PDE6AP16499 860 aa21.87■■□□□ 1.09
HMGN1-219ENST00000491183 OSBPP22059 807 aa21.87■■□□□ 1.09
HMGN1-219ENST00000491183 SLC9C1Q4G0N8 1177 aa21.87■■□□□ 1.09
HMGN1-219ENST00000491183 SLC9C2Q5TAH2 1124 aa21.87■■□□□ 1.09
HMGN1-219ENST00000491183 PROCA1Q8NCQ7 364 aaPredicted RBP21.87■■□□□ 1.09
HMGN1-219ENST00000491183 CENPFP49454 3210 aa21.87■■□□□ 1.09
HMGN1-219ENST00000491183 MGAMO43451 1857 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 TCRBV5S4A2TA0A5A2 114 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 SMARCA5O60264 1052 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-219ENST00000491183 FMNL1O95466 1100 aaPredicted RBP21.86■■□□□ 1.09
HMGN1-219ENST00000491183 HLA-DOAP06340 250 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 ATP5JP18859 108 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 HMGCS2P54868 508 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 PRMT2P55345 433 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 SH3D19Q5HYK7 790 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 SH3TC2Q8TF17 1288 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 WDR18Q9BV38 432 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 BOLA2Q9H3K6 86 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 SRRDQ9UH36 339 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 LOC285556D6RIA3 1793 aa21.86■■□□□ 1.09
HMGN1-219ENST00000491183 ZNF532Q9HCE3 1301 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 RBBP6Q7Z6E9 1792 aaKnown RBP21.85■■□□□ 1.09
HMGN1-219ENST00000491183 MAGEB6P1A0A0J9YX57 407 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 GDF11O95390 407 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 ASNSP08243 561 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 NBPF11Q86T75 865 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 TRIM34Q9BYJ4 488 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 LRRCC1Q9C099 1032 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 AS3MTQ9HBK9 375 aa21.85■■□□□ 1.09
HMGN1-219ENST00000491183 HOXD10P28358 340 aa21.84■■□□□ 1.09
HMGN1-219ENST00000491183 PAG1Q9NWQ8 432 aa21.84■■□□□ 1.09
HMGN1-219ENST00000491183 ZBTB21Q9ULJ3 1066 aa21.84■■□□□ 1.09
HMGN1-219ENST00000491183 KIAA0100Q14667 2235 aaKnown RBP21.83■■□□□ 1.09
HMGN1-219ENST00000491183 EN2P19622 333 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms