RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 ASCC2Q9H1I8 757 aaPredicted RBP19.05■□□□□ 0.64
SCAMP3-208ENST00000490999 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
SCAMP3-208ENST00000490999 EYSQ5T1H1 3165 aa19.05■□□□□ 0.64
SCAMP3-208ENST00000490999 PFASO15067 1338 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 RPTORQ8N122 1335 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 ZNF521Q96K83 1311 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 UBTFL1P0CB47 393 aaPredicted RBP19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 RHBDL3P58872 404 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 MECOMQ03112 1051 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 ZNF384Q8TF68 577 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 HMX1Q9NP08 348 aaPredicted RBP19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 SPTBN5Q9NRC6 3674 aaKnown RBP19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 GJD2Q9UKL4 321 aa19.04■□□□□ 0.64
SCAMP3-208ENST00000490999 PRKAR2AP13861 404 aaKnown RBP19.03■□□□□ 0.64
SCAMP3-208ENST00000490999 CYP2B6P20813 491 aa19.03■□□□□ 0.64
SCAMP3-208ENST00000490999 PI16Q6UXB8 463 aa19.03■□□□□ 0.64
SCAMP3-208ENST00000490999 ZNF280CQ8ND82 737 aa19.03■□□□□ 0.64
SCAMP3-208ENST00000490999 UBE2OQ9C0C9 1292 aaKnown RBP19.03■□□□□ 0.64
SCAMP3-208ENST00000490999 STXBP5LQ9Y2K9 1186 aa19.03■□□□□ 0.64
SCAMP3-208ENST00000490999 DOCK3Q8IZD9 2030 aa19.02■□□□□ 0.64
SCAMP3-208ENST00000490999 CAPN2P17655 700 aa19.02■□□□□ 0.64
SCAMP3-208ENST00000490999 IL15P40933 162 aaPredicted RBP19.02■□□□□ 0.64
SCAMP3-208ENST00000490999 GCLCP48506 637 aaPredicted RBP19.02■□□□□ 0.64
SCAMP3-208ENST00000490999 LRIT3Q3SXY7 679 aa19.02■□□□□ 0.64
SCAMP3-208ENST00000490999 MTMR10Q9NXD2 777 aa19.02■□□□□ 0.64
SCAMP3-208ENST00000490999 ANP32CO43423 234 aa19.01■□□□□ 0.63
SCAMP3-208ENST00000490999 TIMM10P62072 90 aa19.01■□□□□ 0.63
SCAMP3-208ENST00000490999 GPR153Q6NV75 609 aa19.01■□□□□ 0.63
SCAMP3-208ENST00000490999 SLF2Q8IX21 1173 aa19.01■□□□□ 0.63
SCAMP3-208ENST00000490999 OGDHLQ9ULD0 1010 aa19.01■□□□□ 0.63
SCAMP3-208ENST00000490999 PLXNB2O15031 1838 aa19.01■□□□□ 0.63
SCAMP3-208ENST00000490999 GPR75-ASB3A0A0A6YYF3 556 aa19■□□□□ 0.63
SCAMP3-208ENST00000490999 MTMR2Q13614 643 aa19■□□□□ 0.63
SCAMP3-208ENST00000490999 SHROOM1Q2M3G4 852 aaPredicted RBP19■□□□□ 0.63
SCAMP3-208ENST00000490999 FAM163AQ96GL9 167 aaPredicted RBP19■□□□□ 0.63
SCAMP3-208ENST00000490999 OSBPL5Q9H0X9 879 aaPredicted RBP19■□□□□ 0.63
SCAMP3-208ENST00000490999 SMC4Q9NTJ3 1288 aa19■□□□□ 0.63
SCAMP3-208ENST00000490999 FBXO3Q9UK99 471 aa19■□□□□ 0.63
SCAMP3-208ENST00000490999 ATAD5Q96QE3 1844 aa19■□□□□ 0.63
SCAMP3-208ENST00000490999 PDS5AQ29RF7 1337 aaKnown RBP19■□□□□ 0.63
SCAMP3-208ENST00000490999 CDH23Q9H251 3354 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 A0A1B0GUL7 405 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 TBC1D12O60347 775 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 IRX3P78415 501 aaPredicted RBP18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 MDM2Q00987 491 aaPredicted RBP18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 PABPC4Q13310 644 aaKnown RBP eCLIP18.99■□□□□ 0.638e-9■■■■□ 26
SCAMP3-208ENST00000490999 MAP3K21Q5TCX8 1036 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 SPTY2D1Q68D10 685 aaPredicted RBP18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 TBC1D9Q6ZT07 1266 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 TXNRD2Q9NNW7 524 aa18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.99■□□□□ 0.63
SCAMP3-208ENST00000490999 COL2A1P02458 1487 aaPredicted RBP18.98■□□□□ 0.63
SCAMP3-208ENST00000490999 CAP2P40123 477 aa18.98■□□□□ 0.63
SCAMP3-208ENST00000490999 LRRC26Q2I0M4 334 aa18.98■□□□□ 0.63
SCAMP3-208ENST00000490999 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
SCAMP3-208ENST00000490999 COL25A1Q9BXS0 654 aaPredicted RBP18.98■□□□□ 0.63
SCAMP3-208ENST00000490999 MORF4L1Q9UBU8 362 aa18.98■□□□□ 0.63
SCAMP3-208ENST00000490999 USP17L5A8MUK1 530 aa18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 ZKSCAN1P17029 563 aaPredicted RBP18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 CCND3P30281 292 aaPredicted RBP18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 JAG1P78504 1218 aa18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 TFCP2Q12800 502 aa18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 CCL14Q16627 93 aa18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 HMG20BQ9P0W2 317 aa18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 DNAH12Q6ZR08 3092 aa18.97■□□□□ 0.63
SCAMP3-208ENST00000490999 CACNB2Q08289 660 aaPredicted RBP18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 SH3D19Q5HYK7 790 aa18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 TEX11Q8IYF3 940 aa18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 NSUN4Q96CB9 384 aaKnown RBP18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 FAM161BQ96MY7 647 aa18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 P2RX7Q99572 595 aaKnown RBP18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 MEIS3Q99687 375 aa18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 COPRSQ9NQ92 184 aa18.96■□□□□ 0.63
SCAMP3-208ENST00000490999 SIPA1L1O43166 1804 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 COL6A1P12109 1028 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 HERVK_113P62684 666 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 MVPQ14764 893 aaKnown RBP18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 SOCS4Q8WXH5 440 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 NUDT12Q9BQG2 462 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 PAGR1Q9BTK6 254 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 PORCNQ9H237 461 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 AS3MTQ9HBK9 375 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 RAI14Q9P0K7 980 aa18.95■□□□□ 0.62
SCAMP3-208ENST00000490999 E9PSI1 815 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 ZBTB22O15209 634 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 GDF11O95390 407 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 PDE3AQ14432 1141 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 SPATA5Q8NB90 893 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 GPRC5AQ8NFJ5 357 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 NEUROD6Q96NK8 337 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 GUCD1Q96NT3 240 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 TBC1D2Q9BYX2 928 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 DNAJC18Q9H819 358 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 TMOD4Q9NZQ9 345 aa18.94■□□□□ 0.62
SCAMP3-208ENST00000490999 BACE1P56817 501 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms