RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FAM196BA6NMK8 535 aa21.18■□□□□ 0.98
SEC13-218ENST00000490283 GOLIM4O00461 696 aa21.18■□□□□ 0.98
SEC13-218ENST00000490283 TLR2O60603 784 aa21.18■□□□□ 0.98
SEC13-218ENST00000490283 DYNLL1P63167 89 aaKnown RBP21.18■□□□□ 0.98
SEC13-218ENST00000490283 KIF22Q14807 665 aa21.18■□□□□ 0.98
SEC13-218ENST00000490283 OTOP1Q7RTM1 612 aa21.18■□□□□ 0.98
SEC13-218ENST00000490283 EFCC1Q9HA90 598 aa21.18■□□□□ 0.98
SEC13-218ENST00000490283 PDHXO00330 501 aa21.17■□□□□ 0.98
SEC13-218ENST00000490283 SLC9C2Q5TAH2 1124 aa21.17■□□□□ 0.98
SEC13-218ENST00000490283 PARK7Q99497 189 aaKnown RBP21.17■□□□□ 0.98
SEC13-218ENST00000490283 TBC1D2Q9BYX2 928 aa21.17■□□□□ 0.98
SEC13-218ENST00000490283 A0A0G2JLL6 359 aaPredicted RBP21.16■□□□□ 0.98
SEC13-218ENST00000490283 SLURP2P0DP57 97 aa21.16■□□□□ 0.98
SEC13-218ENST00000490283 GADL1Q6ZQY3 521 aa21.16■□□□□ 0.98
SEC13-218ENST00000490283 PRRT2Q7Z6L0 340 aaPredicted RBP21.16■□□□□ 0.98
SEC13-218ENST00000490283 FOXP4Q8IVH2 680 aaPredicted RBP21.16■□□□□ 0.98
SEC13-218ENST00000490283 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
SEC13-218ENST00000490283 BOLA2Q9H3K6 86 aa21.16■□□□□ 0.98
SEC13-218ENST00000490283 SAP30BPQ9UHR5 308 aaKnown RBP21.16■□□□□ 0.98
SEC13-218ENST00000490283 AFG3L2Q9Y4W6 797 aa21.16■□□□□ 0.98
SEC13-218ENST00000490283 MAGEB6P1A0A0J9YX57 407 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 TRIM75PA6NK02 468 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 ATP5JP18859 108 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 CAP2P40123 477 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.15■□□□□ 0.985e-10■□□□□ 8.6
SEC13-218ENST00000490283 AS3MTQ9HBK9 375 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 PAG1Q9NWQ8 432 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 PALD1Q9ULE6 856 aa21.15■□□□□ 0.98
SEC13-218ENST00000490283 PDE6AP16499 860 aa21.14■□□□□ 0.97
SEC13-218ENST00000490283 USP17L5A8MUK1 530 aa21.13■□□□□ 0.97
SEC13-218ENST00000490283 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
SEC13-218ENST00000490283 TTC6Q86TZ1 520 aa21.13■□□□□ 0.97
SEC13-218ENST00000490283 CRNKL1Q9BZJ0 848 aaKnown RBP21.13■□□□□ 0.97
SEC13-218ENST00000490283 DCTPP1Q9H773 170 aa21.13■□□□□ 0.97
SEC13-218ENST00000490283 DOCK1Q14185 1865 aa21.13■□□□□ 0.97
SEC13-218ENST00000490283 ZNF532Q9HCE3 1301 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 ASNSP08243 561 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 MLLT1Q03111 559 aaPredicted RBP21.12■□□□□ 0.97
SEC13-218ENST00000490283 MOGSQ13724 837 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 ZNF280CQ8ND82 737 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 HAUS7Q99871 368 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 GINM1Q9NU53 330 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 PTPN22Q9Y2R2 807 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 SLC45A1Q9Y2W3 748 aa21.12■□□□□ 0.97
SEC13-218ENST00000490283 SOX10P56693 466 aa21.11■□□□□ 0.97
SEC13-218ENST00000490283 SLC4A8Q2Y0W8 1093 aa21.11■□□□□ 0.97
SEC13-218ENST00000490283 ZSCAN25Q6NSZ9 544 aa21.11■□□□□ 0.97
SEC13-218ENST00000490283 CCDC84Q86UT8 332 aaPredicted RBP21.11■□□□□ 0.97
SEC13-218ENST00000490283 ECHDC1Q9NTX5 307 aa21.11■□□□□ 0.97
SEC13-218ENST00000490283 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.11■□□□□ 0.97
SEC13-218ENST00000490283 CPA4Q9UI42 421 aa21.11■□□□□ 0.97
SEC13-218ENST00000490283 GNRH1P01148 92 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 RGS19P49795 217 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 LACTBP83111 547 aaPredicted RBP21.1■□□□□ 0.97
SEC13-218ENST00000490283 SPP2Q13103 211 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 GPAT2Q6NUI2 795 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 C17orf99Q6UX52 265 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 METTL16Q86W50 562 aaKnown RBP21.1■□□□□ 0.97
SEC13-218ENST00000490283 EDC3Q96F86 508 aaKnown RBP21.1■□□□□ 0.97
SEC13-218ENST00000490283 RIOK1Q9BRS2 568 aaKnown RBP21.1■□□□□ 0.97
SEC13-218ENST00000490283 ZBTB47Q9UFB7 747 aaPredicted RBP21.1■□□□□ 0.97
SEC13-218ENST00000490283 PNMA3Q9UL41 463 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 AGTPBP1Q9UPW5 1226 aa21.1■□□□□ 0.97
SEC13-218ENST00000490283 MYO5AQ9Y4I1 1855 aaKnown RBP21.09■□□□□ 0.97
SEC13-218ENST00000490283 POLR3DP05423 398 aaPredicted RBP21.09■□□□□ 0.97
SEC13-218ENST00000490283 PABPC4Q13310 644 aaKnown RBP eCLIP21.09■□□□□ 0.971e-8■□□□□ 8.5
SEC13-218ENST00000490283 PROCA1Q8NCQ7 364 aaPredicted RBP21.09■□□□□ 0.97
SEC13-218ENST00000490283 SMCR8Q8TEV9 937 aaPredicted RBP21.09■□□□□ 0.97
SEC13-218ENST00000490283 EHD4Q9H223 541 aa21.09■□□□□ 0.97
SEC13-218ENST00000490283 SERPINB13Q9UIV8 391 aa21.09■□□□□ 0.97
SEC13-218ENST00000490283 GDF11O95390 407 aa21.08■□□□□ 0.97
SEC13-218ENST00000490283 CYP2C8P10632 490 aa21.08■□□□□ 0.97
SEC13-218ENST00000490283 ADD2P35612 726 aa21.08■□□□□ 0.97
SEC13-218ENST00000490283 DNAJC18Q9H819 358 aa21.08■□□□□ 0.97
SEC13-218ENST00000490283 TCRBV5S4A2TA0A5A2 114 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 HOXD10P28358 340 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 PRMT2P55345 433 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 RRP1BQ14684 758 aaKnown RBP21.07■□□□□ 0.96
SEC13-218ENST00000490283 CRBNQ96SW2 442 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 TMOD4Q9NZQ9 345 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 ZBTB21Q9ULJ3 1066 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 PCDHB15Q9Y5E8 787 aa21.07■□□□□ 0.96
SEC13-218ENST00000490283 ADGRA2Q96PE1 1338 aa21.06■□□□□ 0.96
SEC13-218ENST00000490283 FOCADQ5VW36 1801 aa21.06■□□□□ 0.96
SEC13-218ENST00000490283 FMNL1O95466 1100 aaPredicted RBP21.06■□□□□ 0.96
SEC13-218ENST00000490283 HMGCS2P54868 508 aa21.06■□□□□ 0.96
SEC13-218ENST00000490283 NBPF11Q86T75 865 aa21.06■□□□□ 0.96
SEC13-218ENST00000490283 DDRGK1Q96HY6 314 aa21.06■□□□□ 0.96
SEC13-218ENST00000490283 WDR18Q9BV38 432 aa21.06■□□□□ 0.96
SEC13-218ENST00000490283 PSMC4P43686 418 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 UBE3CQ15386 1083 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 SLC9C1Q4G0N8 1177 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 AMOTL1Q8IY63 956 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 LCORLQ8N3X6 602 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 ARHGAP39Q9C0H5 1083 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 ARMT1Q9H993 441 aa21.05■□□□□ 0.96
SEC13-218ENST00000490283 C19orf81C9J6K1 198 aa21.04■□□□□ 0.96
SEC13-218ENST00000490283 ECM2O94769 699 aaPredicted RBP21.04■□□□□ 0.96
SEC13-218ENST00000490283 MBD4O95243 580 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms