RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 TUT1Q9H6E5 874 aaKnown RBP4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 ZFYVE28Q9HCC9 887 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 PIK3C2BO00750 1634 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 HFM1A2PYH4 1435 aa4.71□□□□□ -1.66
CRNKL1-203ENST00000490258 A2MP01023 1474 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 CYP26A1O43174 497 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 CTSWP56202 376 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 ZNF792Q3KQV3 632 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 CEP135Q66GS9 1140 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 NXPE3Q969Y0 559 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 SIN3AQ96ST3 1273 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 ARID3AQ99856 593 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 SH2B1Q9NRF2 756 aaPredicted RBP4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 PPME1Q9Y570 386 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 MYO3AQ8NEV4 1616 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 EFCAB6Q5THR3 1501 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 KDM5DQ9BY66 1539 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 DUOX2Q9NRD8 1548 aa4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 ZC3H13Q5T200 1668 aaKnown RBP4.7□□□□□ -1.66
CRNKL1-203ENST00000490258 MAGI2Q86UL8 1455 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 ABCC3O15438 1527 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 LINC01387J3KSC0 135 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 ABL1P00519 1130 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 CES1P23141 567 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 CDC27P30260 824 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 MLECQ14165 292 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 PLCL1Q15111 1095 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 USPL1Q5W0Q7 1092 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 TXNDC11Q6PKC3 985 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 TCF12Q99081 682 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 METTL22Q9BUU2 404 aaPredicted RBP4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 LACRTQ9GZZ8 138 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 VWDEQ8N2E2 1590 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 ATP10AO60312 1499 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 ZNF518AQ6AHZ1 1483 aa4.69□□□□□ -1.66
CRNKL1-203ENST00000490258 TRPM1Q7Z4N2 1603 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 SOWAHDA6NJG2 315 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 PDE2AO00408 941 aaPredicted RBP4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 FSCN2O14926 492 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 SMNDC1O75940 238 aaKnown RBP eCLIP4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 TSPAN15O95858 294 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 USP5P45974 858 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 PREPP48147 710 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 EHHADHQ08426 723 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 DUOXA2Q1HG44 320 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 C8orf34Q49A92 452 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 ANKRD34AQ69YU3 496 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 B4GALNT3Q6L9W6 998 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 NCAPG2Q86XI2 1143 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 GALNT12Q8IXK2 581 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 CARD10Q9BWT7 1032 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 CCDC9Q9Y3X0 531 aaKnown RBP4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 NCOA1Q15788 1441 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 SETD1AO15047 1707 aaKnown RBP4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 TEX14Q8IWB6 1497 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 NEO1Q92859 1461 aa4.68□□□□□ -1.66
CRNKL1-203ENST00000490258 ZNF142P52746 1687 aaPredicted RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 POLR1AO95602 1720 aaPredicted RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 ANKRD50Q9ULJ7 1429 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 A0A1W2PP55 124 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 METTL12A8MUP2 240 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 H3BRJ5 948 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 DDX3YO15523 660 aaKnown RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 ANP32CO43423 234 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 PHACTR2O75167 634 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 DLGAP3O95886 979 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 INHBBP09529 407 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 MAP4P27816 1152 aaKnown RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 DDX10Q13206 875 aaKnown RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 CCNJLQ8IV13 435 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 GLIS3Q8NEA6 775 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 UBASH3BQ8TF42 649 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 ALKBH8Q96BT7 664 aaKnown RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 KLHDC7BQ96G42 594 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 OSMRQ99650 979 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 RBSNQ9H1K0 784 aa4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 CDK11AQ9UQ88 783 aaPredicted RBP4.67□□□□□ -1.66
CRNKL1-203ENST00000490258 UBR1Q8IWV7 1749 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 POLR3DP05423 398 aaPredicted RBP4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 PTPRAP18433 802 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 ORC1Q13415 861 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 ANKLE2Q86XL3 938 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 SHISA5Q8N114 240 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 WNT8BQ93098 351 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 PMEPA1Q969W9 287 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 RBCK1Q9BYM8 510 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 PPP4R2Q9NY27 417 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 MTMR7Q9Y216 660 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 AMOTL2Q9Y2J4 779 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 ADAMTSL3P82987 1691 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 SPAG9O60271 1321 aaKnown RBP4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 ASXL1Q8IXJ9 1541 aa4.66□□□□□ -1.66
CRNKL1-203ENST00000490258 QRICH2Q9H0J4 1663 aa4.65□□□□□ -1.66
CRNKL1-203ENST00000490258 LRRC10BA6NIK2 292 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 SOX1O00570 391 aaPredicted RBP4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 BRD1O95696 1058 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 ESRRAP11474 423 aaPredicted RBP4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 PCSK2P16519 638 aa4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 DEKP35659 375 aaKnown RBP4.65□□□□□ -1.67
CRNKL1-203ENST00000490258 GRIA4P48058 902 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms