RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 MOB2Q70IA6 237 aa20.89■□□□□ 0.93
ERCC3-207ENST00000490062 ZNF589Q86UQ0 364 aaPredicted RBP20.89■□□□□ 0.93
ERCC3-207ENST00000490062 RUFY2Q8WXA3 655 aa20.89■□□□□ 0.93
ERCC3-207ENST00000490062 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
ERCC3-207ENST00000490062 DNAJC18Q9H819 358 aa20.89■□□□□ 0.93
ERCC3-207ENST00000490062 SERPINB13Q9UIV8 391 aa20.89■□□□□ 0.93
ERCC3-207ENST00000490062 ROBO3Q96MS0 1386 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 UBE2Q2LH0YL09 131 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 TTLL12Q14166 644 aaPredicted RBP20.88■□□□□ 0.93
ERCC3-207ENST00000490062 RGMBQ6NW40 437 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 CTR9Q6PD62 1173 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 CWC27Q6UX04 472 aaKnown RBP20.88■□□□□ 0.93
ERCC3-207ENST00000490062 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 IFNL3Q8IZI9 196 aa20.88■□□□□ 0.93
ERCC3-207ENST00000490062 SAP30BPQ9UHR5 308 aaKnown RBP20.88■□□□□ 0.93
ERCC3-207ENST00000490062 USP17L12C9JPN9 530 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 USP17L21D6R901 530 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 POLR3DP05423 398 aaPredicted RBP20.87■□□□□ 0.93
ERCC3-207ENST00000490062 PLCD1P51178 756 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 TATDN1Q6P1N9 297 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 DNAJC5GQ8N7S2 189 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 WRNIP1Q96S55 665 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 GINM1Q9NU53 330 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 FZD1Q9UP38 647 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 LAMB1P07942 1786 aa20.87■□□□□ 0.93
ERCC3-207ENST00000490062 THSD7BQ9C0I4 1608 aa20.86■□□□□ 0.93
ERCC3-207ENST00000490062 CTNND1O60716 968 aaKnown RBP20.86■□□□□ 0.93
ERCC3-207ENST00000490062 HSPD1P10809 573 aaKnown RBP20.86■□□□□ 0.93
ERCC3-207ENST00000490062 PRKG1Q13976 671 aa20.86■□□□□ 0.93
ERCC3-207ENST00000490062 AMOTL1Q8IY63 956 aa20.86■□□□□ 0.93
ERCC3-207ENST00000490062 CCDC102AQ96A19 550 aa20.86■□□□□ 0.93
ERCC3-207ENST00000490062 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
ERCC3-207ENST00000490062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.86■□□□□ 0.93
ERCC3-207ENST00000490062 FAM155AB1AL88 458 aaPredicted RBP20.85■□□□□ 0.93
ERCC3-207ENST00000490062 SGSM2O43147 1006 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 SLC10A3P09131 477 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 ECE1P42892 770 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 HTRA3P83110 453 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 VGLL4Q14135 290 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 VPS53Q5VIR6 699 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 IL25Q9H293 177 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 SWAP70Q9UH65 585 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 SNCAIPQ9Y6H5 919 aa20.85■□□□□ 0.93
ERCC3-207ENST00000490062 INPP5BP32019 993 aa20.84■□□□□ 0.93
ERCC3-207ENST00000490062 RASAL3Q86YV0 1011 aa20.84■□□□□ 0.93
ERCC3-207ENST00000490062 NAPBQ9H115 298 aa20.84■□□□□ 0.93
ERCC3-207ENST00000490062 CSADQ9Y600 493 aa20.84■□□□□ 0.93
ERCC3-207ENST00000490062 DOCK1Q14185 1865 aa20.84■□□□□ 0.93
ERCC3-207ENST00000490062 SPDYE5A6NIY4 337 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 ZBTB48P10074 688 aaPredicted RBP20.83■□□□□ 0.93
ERCC3-207ENST00000490062 CAP2P40123 477 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 TDO2P48775 406 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 ZNF157P51786 506 aaPredicted RBP20.83■□□□□ 0.93
ERCC3-207ENST00000490062 C16orf86Q6ZW13 317 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 SCYL3Q8IZE3 742 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 CRACR2BQ8N4Y2 399 aaPredicted RBP20.83■□□□□ 0.93
ERCC3-207ENST00000490062 CLMNQ96JQ2 1002 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 ANAPC4Q9UJX5 808 aa20.83■□□□□ 0.93
ERCC3-207ENST00000490062 CDC45O75419 566 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 FGAP02671 866 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 APPP05067 770 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 SLURP2P0DP57 97 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 CYP2D6P10635 497 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 SHMT1P34896 483 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 ERO1BQ86YB8 467 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 SLC10A4Q96EP9 437 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 CAPNS2Q96L46 248 aa20.82■□□□□ 0.92
ERCC3-207ENST00000490062 FAM196BA6NMK8 535 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 EVX2Q03828 476 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 NOGQ13253 232 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 RRP1BQ14684 758 aaKnown RBP20.81■□□□□ 0.92
ERCC3-207ENST00000490062 SPRYD7Q5W111 196 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 ZKSCAN4Q969J2 545 aaPredicted RBP20.81■□□□□ 0.92
ERCC3-207ENST00000490062 ESYT1Q9BSJ8 1104 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 TRIM34Q9BYJ4 488 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
ERCC3-207ENST00000490062 WDR33Q9C0J8 1336 aaKnown RBP20.8■□□□□ 0.92
ERCC3-207ENST00000490062 CYP2D7A0A087X1C5 515 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 FGRP09769 529 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 MAP2K2P36507 400 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 VEGFBP49765 207 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 PPATQ06203 517 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 CYP4F22Q6NT55 531 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 WNK4Q96J92 1243 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 CCDC17Q96LX7 622 aa20.8■□□□□ 0.92
ERCC3-207ENST00000490062 ATAD5Q96QE3 1844 aa20.79■□□□□ 0.92
ERCC3-207ENST00000490062 ASNSP08243 561 aa20.79■□□□□ 0.92
ERCC3-207ENST00000490062 CDK8P49336 464 aa20.79■□□□□ 0.92
ERCC3-207ENST00000490062 NT5C2P49902 561 aa20.79■□□□□ 0.92
ERCC3-207ENST00000490062 PPARAQ07869 468 aa20.79■□□□□ 0.92
ERCC3-207ENST00000490062 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
ERCC3-207ENST00000490062 REM2Q8IYK8 340 aaPredicted RBP20.79■□□□□ 0.92
ERCC3-207ENST00000490062 LAMA4Q16363 1823 aa20.78■□□□□ 0.92
ERCC3-207ENST00000490062 PHIPQ8WWQ0 1821 aa20.78■□□□□ 0.92
ERCC3-207ENST00000490062 SMIM22K7EJ46 135 aa20.78■□□□□ 0.92
ERCC3-207ENST00000490062 PCP11498 1178 aaKnown RBP20.78■□□□□ 0.92
ERCC3-207ENST00000490062 PTPRAP18433 802 aa20.78■□□□□ 0.92
ERCC3-207ENST00000490062 PPIL2Q13356 520 aa20.78■□□□□ 0.92
ERCC3-207ENST00000490062 SLC4A8Q2Y0W8 1093 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms