RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 FLT1P17948 1338 aa21.63■■□□□ 1.05
ABCF3-217ENST00000489719 HLA-DOAP06340 250 aa21.63■■□□□ 1.05
ABCF3-217ENST00000489719 FBXO46Q6PJ61 603 aaPredicted RBP21.63■■□□□ 1.05
ABCF3-217ENST00000489719 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
ABCF3-217ENST00000489719 SAP30BPQ9UHR5 308 aaKnown RBP21.63■■□□□ 1.05
ABCF3-217ENST00000489719 PALD1Q9ULE6 856 aa21.63■■□□□ 1.05
ABCF3-217ENST00000489719 AFG3L2Q9Y4W6 797 aa21.63■■□□□ 1.05
ABCF3-217ENST00000489719 MAGEB6P1A0A0J9YX57 407 aa21.62■■□□□ 1.05
ABCF3-217ENST00000489719 PDHXO00330 501 aa21.62■■□□□ 1.05
ABCF3-217ENST00000489719 TLR2O60603 784 aa21.62■■□□□ 1.05
ABCF3-217ENST00000489719 EFCC1Q9HA90 598 aa21.62■■□□□ 1.05
ABCF3-217ENST00000489719 PAG1Q9NWQ8 432 aa21.62■■□□□ 1.05
ABCF3-217ENST00000489719 HPS5Q9UPZ3 1129 aa21.62■■□□□ 1.05
ABCF3-217ENST00000489719 COL2A1P02458 1487 aaPredicted RBP21.61■■□□□ 1.05
ABCF3-217ENST00000489719 PDE6AP16499 860 aa21.61■■□□□ 1.05
ABCF3-217ENST00000489719 CAP2P40123 477 aa21.61■■□□□ 1.05
ABCF3-217ENST00000489719 HAUS7Q99871 368 aa21.61■■□□□ 1.05
ABCF3-217ENST00000489719 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.61■■□□□ 1.053e-6■■■■■ 34.1
ABCF3-217ENST00000489719 PCDHB15Q9Y5E8 787 aa21.61■■□□□ 1.05
ABCF3-217ENST00000489719 OTOFQ9HC10 1997 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 TRIM75PA6NK02 468 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 KIF22Q14807 665 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 GADL1Q6ZQY3 521 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 OTOP1Q7RTM1 612 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 EDC3Q96F86 508 aaKnown RBP21.6■■□□□ 1.05
ABCF3-217ENST00000489719 GPATCH3Q96I76 525 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 TBC1D2Q9BYX2 928 aa21.6■■□□□ 1.05
ABCF3-217ENST00000489719 ZNF532Q9HCE3 1301 aa21.59■■□□□ 1.05
ABCF3-217ENST00000489719 A0A0G2JLL6 359 aaPredicted RBP21.59■■□□□ 1.05
ABCF3-217ENST00000489719 MOGSQ13724 837 aa21.59■■□□□ 1.05
ABCF3-217ENST00000489719 PRRT2Q7Z6L0 340 aaPredicted RBP21.59■■□□□ 1.05
ABCF3-217ENST00000489719 TTC6Q86TZ1 520 aa21.59■■□□□ 1.05
ABCF3-217ENST00000489719 METTL16Q86W50 562 aaKnown RBP21.59■■□□□ 1.05
ABCF3-217ENST00000489719 CRBNQ96SW2 442 aa21.59■■□□□ 1.05
ABCF3-217ENST00000489719 ECHDC1Q9NTX5 307 aa21.59■■□□□ 1.05
ABCF3-217ENST00000489719 USP17L5A8MUK1 530 aa21.58■■□□□ 1.05
ABCF3-217ENST00000489719 SPP2Q13103 211 aa21.58■■□□□ 1.05
ABCF3-217ENST00000489719 GPAT2Q6NUI2 795 aa21.58■■□□□ 1.05
ABCF3-217ENST00000489719 ZNF280CQ8ND82 737 aa21.58■■□□□ 1.05
ABCF3-217ENST00000489719 RIOK1Q9BRS2 568 aaKnown RBP21.58■■□□□ 1.05
ABCF3-217ENST00000489719 CRNKL1Q9BZJ0 848 aaKnown RBP21.58■■□□□ 1.05
ABCF3-217ENST00000489719 AS3MTQ9HBK9 375 aa21.58■■□□□ 1.05
ABCF3-217ENST00000489719 RRP1BQ14684 758 aaKnown RBP21.57■■□□□ 1.04
ABCF3-217ENST00000489719 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
ABCF3-217ENST00000489719 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
ABCF3-217ENST00000489719 CCDC84Q86UT8 332 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-217ENST00000489719 PARK7Q99497 189 aaKnown RBP21.57■■□□□ 1.04
ABCF3-217ENST00000489719 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-217ENST00000489719 ZBTB47Q9UFB7 747 aaPredicted RBP21.57■■□□□ 1.04
ABCF3-217ENST00000489719 POLR3DP05423 398 aaPredicted RBP21.56■■□□□ 1.04
ABCF3-217ENST00000489719 ASNSP08243 561 aa21.56■■□□□ 1.04
ABCF3-217ENST00000489719 C17orf99Q6UX52 265 aa21.56■■□□□ 1.04
ABCF3-217ENST00000489719 GINM1Q9NU53 330 aa21.56■■□□□ 1.04
ABCF3-217ENST00000489719 CPA4Q9UI42 421 aa21.56■■□□□ 1.04
ABCF3-217ENST00000489719 PTPN22Q9Y2R2 807 aa21.56■■□□□ 1.04
ABCF3-217ENST00000489719 TCRBV5S4A2TA0A5A2 114 aa21.55■■□□□ 1.04
ABCF3-217ENST00000489719 ADD2P35612 726 aa21.55■■□□□ 1.04
ABCF3-217ENST00000489719 SERPINB13Q9UIV8 391 aa21.55■■□□□ 1.04
ABCF3-217ENST00000489719 SLC45A1Q9Y2W3 748 aa21.54■■□□□ 1.04
ABCF3-217ENST00000489719 CYP2C8P10632 490 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 RGS19P49795 217 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 LACTBP83111 547 aaPredicted RBP21.53■■□□□ 1.04
ABCF3-217ENST00000489719 UBE3CQ15386 1083 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 WDR18Q9BV38 432 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 EHD4Q9H223 541 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 DNAJC18Q9H819 358 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 MCM9Q9NXL9 1143 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 AGTPBP1Q9UPW5 1226 aa21.53■■□□□ 1.04
ABCF3-217ENST00000489719 GDF11O95390 407 aa21.52■■□□□ 1.04
ABCF3-217ENST00000489719 GNRH1P01148 92 aa21.52■■□□□ 1.04
ABCF3-217ENST00000489719 PABPC4Q13310 644 aaKnown RBP eCLIP21.52■■□□□ 1.04
ABCF3-217ENST00000489719 AAMPQ13685 434 aa21.52■■□□□ 1.04
ABCF3-217ENST00000489719 LCORLQ8N3X6 602 aa21.52■■□□□ 1.04
ABCF3-217ENST00000489719 PROCA1Q8NCQ7 364 aaPredicted RBP21.52■■□□□ 1.04
ABCF3-217ENST00000489719 ARMT1Q9H993 441 aa21.52■■□□□ 1.04
ABCF3-217ENST00000489719 MBD4O95243 580 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 FMNL1O95466 1100 aaPredicted RBP21.51■■□□□ 1.03
ABCF3-217ENST00000489719 PLCD1P51178 756 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 HMGCS2P54868 508 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 SOX10P56693 466 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 MLLT1Q03111 559 aaPredicted RBP21.51■■□□□ 1.03
ABCF3-217ENST00000489719 SLFNL1Q499Z3 407 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 CERKLQ49MI3 558 aaPredicted RBP21.51■■□□□ 1.03
ABCF3-217ENST00000489719 TATDN1Q6P1N9 297 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 SMCR8Q8TEV9 937 aaPredicted RBP21.51■■□□□ 1.03
ABCF3-217ENST00000489719 TMOD4Q9NZQ9 345 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 PNMA3Q9UL41 463 aa21.51■■□□□ 1.03
ABCF3-217ENST00000489719 DOCK2Q92608 1830 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 ERC2O15083 957 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 ECM2O94769 699 aaPredicted RBP21.5■■□□□ 1.03
ABCF3-217ENST00000489719 HOXD10P28358 340 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 PSMC4P43686 418 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 JAG1P78504 1218 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 CAP1Q01518 475 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 ANKRD45Q5TZF3 282 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 SDR42E1Q8WUS8 393 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 DDRGK1Q96HY6 314 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 CABP5Q9NP86 173 aa21.5■■□□□ 1.03
ABCF3-217ENST00000489719 DCP1AQ9NPI6 582 aaPredicted RBP21.5■■□□□ 1.03
ABCF3-217ENST00000489719 ATP8A2Q9NTI2 1148 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms