RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 UNCXA6NJT0 531 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 M0R2C6 588 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 RNF113AO15541 343 aaKnown RBP14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 TRPA1O75762 1119 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 CYP2D6P10635 497 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 PDE4AP27815 886 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 CTCFP49711 727 aaPredicted RBP14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 ZSCAN25Q6NSZ9 544 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 TMED8Q6PL24 325 aaPredicted RBP14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 PLEKHM2Q8IWE5 1019 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 OSBP2Q969R2 916 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 RNF186Q9NXI6 227 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
SMARCD3-213ENST00000489503 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 IGF2BP3O00425 579 aaKnown RBP eCLIP14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 MAP3K10Q02779 954 aa14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 NOL9Q5SY16 702 aaKnown RBP14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 ERO1BQ86YB8 467 aa14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 CERS3Q8IU89 383 aa14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 CRACR2BQ8N4Y2 399 aaPredicted RBP14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 APPBP2Q92624 585 aa14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 SEC62Q99442 399 aaKnown RBP14.79□□□□□ -0.04
SMARCD3-213ENST00000489503 CYP2D7A0A087X1C5 515 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 CCL15-CCL14A0A0B4J2E2 113 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 MANSC4A6NHS7 340 aaPredicted RBP14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 IRF6O14896 467 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 GDF11O95390 407 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 HLA-DOAP06340 250 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 JAG1P78504 1218 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 SREBF2Q12772 1141 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 PPIL2Q13356 520 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 CCL15Q16663 113 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 BRI3BPQ8WY22 251 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 MS4A4AQ96JQ5 239 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 DHX36Q9H2U1 1008 aaKnown RBP14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 DCP1AQ9NPI6 582 aaPredicted RBP14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 MCM9Q9NXL9 1143 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 SLC4A4Q9Y6R1 1079 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 PTPRFP10586 1907 aa14.78□□□□□ -0.04
SMARCD3-213ENST00000489503 CASP8AP2Q9UKL3 1982 aa14.77□□□□□ -0.04
SMARCD3-213ENST00000489503 TBC1D12O60347 775 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 TM4SF4P48230 202 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 PLCD1P51178 756 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 COL13A1Q5TAT6 717 aaPredicted RBP14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 CCDC129Q6ZRS4 1044 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 PTPN18Q99952 460 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 TRIM34Q9BYJ4 488 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 R3HDMLQ9H3Y0 253 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 PICK1Q9NRD5 415 aa14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
SMARCD3-213ENST00000489503 TRIM6-TRIM34B2RNG4 842 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 GPAA1O43292 621 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 CTNND1O60716 968 aaKnown RBP14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 TBC1D8O95759 1140 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 POLR3DP05423 398 aaPredicted RBP14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 ZFYP08048 801 aaPredicted RBP14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 PTPRAP18433 802 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 SKAP1Q86WV1 359 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 IFNL1Q8IU54 200 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 SLC44A5Q8NCS7 719 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 EVI5LQ96CN4 794 aa14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 STRBPQ96SI9 672 aaKnown RBP14.76□□□□□ -0.05
SMARCD3-213ENST00000489503 MYH8P13535 1937 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 CA12O43570 354 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 CAP2P40123 477 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 GTF2A2P52657 109 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 PPATQ06203 517 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 FAM43AQ8N2R8 423 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 DYNLL2Q96FJ2 89 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 EPB41L4AQ9HCS5 686 aaPredicted RBP14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 SAGE1Q9NXZ1 904 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 ZHX2Q9Y6X8 837 aa14.75□□□□□ -0.05
SMARCD3-213ENST00000489503 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 TRIM75PA6NK02 468 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 SHMT1P34896 483 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 SNAPC2Q13487 334 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 DGKZQ13574 1117 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 METTL16Q86W50 562 aaKnown RBP14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 FOXP4Q8IVH2 680 aaPredicted RBP14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 FAM227BQ96M60 508 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 EHD4Q9H223 541 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 OSBPL3Q9H4L5 887 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 SERPINB13Q9UIV8 391 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 KCNH4Q9UQ05 1017 aa14.74□□□□□ -0.05
SMARCD3-213ENST00000489503 TESPA1A2RU30 521 aaPredicted RBP14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 GSG1L2A8MUP6 293 aa14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 BTBD19C9JJ37 291 aa14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 USP17L12C9JPN9 530 aa14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 USP17L21D6R901 530 aa14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 GSPT1P15170 499 aaKnown RBP14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 NMIQ13287 307 aaPredicted RBP14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 LRRFIP1Q32MZ4 808 aaKnown RBP14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 STK11IPQ8N1F8 1099 aa14.73□□□□□ -0.05
SMARCD3-213ENST00000489503 ATP8A2Q9NTI2 1148 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms