RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
CLDN11-209ENST00000489485 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 SERPINB13Q9UIV8 391 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 FAM196BA6NMK8 535 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 EPB41L2O43491 1005 aaKnown RBP16.93■□□□□ 0.3
CLDN11-209ENST00000489485 SLURP2P0DP57 97 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 NF2P35240 595 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 CTDSPL2Q05D32 466 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 FMR1Q06787 632 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLDN11-209ENST00000489485 SMC1BQ8NDV3 1235 aa16.93■□□□□ 0.3
CLDN11-209ENST00000489485 SIPA1L1O43166 1804 aa16.92■□□□□ 0.3
CLDN11-209ENST00000489485 PRKG1Q13976 671 aa16.92■□□□□ 0.3
CLDN11-209ENST00000489485 NECTIN1Q15223 517 aa16.92■□□□□ 0.3
CLDN11-209ENST00000489485 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
CLDN11-209ENST00000489485 HOOK2Q96ED9 719 aa16.92■□□□□ 0.3
CLDN11-209ENST00000489485 DYNLL2Q96FJ2 89 aa16.92■□□□□ 0.3
CLDN11-209ENST00000489485 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
CLDN11-209ENST00000489485 LAMA4Q16363 1823 aa16.91■□□□□ 0.3
CLDN11-209ENST00000489485 MYH8P13535 1937 aa16.91■□□□□ 0.3
CLDN11-209ENST00000489485 ITGBL1O95965 494 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-209ENST00000489485 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
CLDN11-209ENST00000489485 CYP21A2P08686 494 aa16.91■□□□□ 0.3
CLDN11-209ENST00000489485 MCCP23508 829 aa16.91■□□□□ 0.3
CLDN11-209ENST00000489485 HSPA4P34932 840 aa16.91■□□□□ 0.3
CLDN11-209ENST00000489485 RBM46Q8TBY0 533 aaKnown RBP16.91■□□□□ 0.3
CLDN11-209ENST00000489485 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLDN11-209ENST00000489485 RNF20Q5VTR2 975 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 EHD4Q9H223 541 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 HERC5Q9UII4 1024 aaKnown RBP16.9■□□□□ 0.3
CLDN11-209ENST00000489485 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 RBM25P49756 843 aaKnown RBP16.9■□□□□ 0.3
CLDN11-209ENST00000489485 DCAF15Q66K64 600 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 CREB3L3Q68CJ9 461 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 SLC44A5Q8NCS7 719 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 TOMM22Q9NS69 142 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 ANAPC4Q9UJX5 808 aa16.9■□□□□ 0.3
CLDN11-209ENST00000489485 SLC27A2O14975 620 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 PPP1R12BO60237 982 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-209ENST00000489485 PRDM1O75626 825 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 PDE4BQ07343 736 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
CLDN11-209ENST00000489485 RASEFQ8IZ41 740 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 MKNK2Q9HBH9 465 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 SSC5DA1L4H1 1573 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.29
CLDN11-209ENST00000489485 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
CLDN11-209ENST00000489485 CDK8P49336 464 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 GABPAQ06546 454 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 MFSD6Q6ZSS7 791 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 C16orf86Q6ZW13 317 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 NBPF3Q9H094 633 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 DNAJC18Q9H819 358 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 ZNF287Q9HBT7 754 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 TAF6LQ9Y6J9 622 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 TBC1D12O60347 775 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 CELF2O95319 508 aaKnown RBP16.88■□□□□ 0.29
CLDN11-209ENST00000489485 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
CLDN11-209ENST00000489485 AKNAD1Q5T1N1 836 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 METTL16Q86W50 562 aaKnown RBP16.88■□□□□ 0.29
CLDN11-209ENST00000489485 TBC1D10CQ8IV04 446 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
CLDN11-209ENST00000489485 TRPM7Q96QT4 1865 aa16.87■□□□□ 0.29
CLDN11-209ENST00000489485 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
CLDN11-209ENST00000489485 ZNF341Q9BYN7 854 aa16.87■□□□□ 0.29
CLDN11-209ENST00000489485 RNF41Q9H4P4 317 aaPredicted RBP16.87■□□□□ 0.29
CLDN11-209ENST00000489485 ANGEL1Q9UNK9 670 aaKnown RBP16.87■□□□□ 0.29
CLDN11-209ENST00000489485 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
CLDN11-209ENST00000489485 SHMT1P34896 483 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 STAG1Q8WVM7 1258 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 WRNIP1Q96S55 665 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 E7EWF7 191 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 USP2O75604 605 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-209ENST00000489485 FSTL1Q12841 308 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 TRDNQ13061 729 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 CERKLQ49MI3 558 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-209ENST00000489485 MOB2Q70IA6 237 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
CLDN11-209ENST00000489485 KIF2CQ99661 725 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 TACC3Q9Y6A5 838 aa16.86■□□□□ 0.29
CLDN11-209ENST00000489485 RANBP6O60518 1105 aaKnown RBP16.85■□□□□ 0.29
CLDN11-209ENST00000489485 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
CLDN11-209ENST00000489485 IREB2P48200 963 aaKnown RBP16.85■□□□□ 0.29
CLDN11-209ENST00000489485 TATDN1Q6P1N9 297 aa16.85■□□□□ 0.29
CLDN11-209ENST00000489485 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
CLDN11-209ENST00000489485 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.85■□□□□ 0.29
CLDN11-209ENST00000489485 NEDD4P46934 1319 aa16.85■□□□□ 0.29
CLDN11-209ENST00000489485 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
CLDN11-209ENST00000489485 MPHOSPH10O00566 681 aaKnown RBP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 GDF11O95390 407 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 ANAPC15P60006 121 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 CST9Q5W186 159 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 STOX1Q6ZVD7 989 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 C2orf69Q8N8R5 385 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 KCNB2Q92953 911 aa16.84■□□□□ 0.29
CLDN11-209ENST00000489485 GBA2Q9HCG7 927 aaPredicted RBP16.84■□□□□ 0.29
CLDN11-209ENST00000489485 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms