RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 BTBD18B2RXH4 712 aa8.79□□□□□ -1
BEST3-205ENST00000488961 ADAMTS3O15072 1205 aa8.79□□□□□ -1
BEST3-205ENST00000488961 USP49Q70CQ1 688 aa8.79□□□□□ -1
BEST3-205ENST00000488961 CPVLQ9H3G5 476 aa8.79□□□□□ -1
BEST3-205ENST00000488961 CCDC87Q9NVE4 849 aa8.79□□□□□ -1
BEST3-205ENST00000488961 ZNF215Q9UL58 517 aaPredicted RBP8.79□□□□□ -1
BEST3-205ENST00000488961 GOLGA6L19H0YKK7 550 aa8.79□□□□□ -1
BEST3-205ENST00000488961 CIAO1O76071 339 aa8.79□□□□□ -1
BEST3-205ENST00000488961 ATP1A3P13637 1013 aa8.79□□□□□ -1
BEST3-205ENST00000488961 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
BEST3-205ENST00000488961 SYNE3Q6ZMZ3 975 aa8.79□□□□□ -1
BEST3-205ENST00000488961 LINC00116Q8NCU8 138 aa8.79□□□□□ -1
BEST3-205ENST00000488961 CACTINQ8WUQ7 758 aaKnown RBP8.79□□□□□ -1
BEST3-205ENST00000488961 NGLY1Q96IV0 654 aa8.79□□□□□ -1
BEST3-205ENST00000488961 STRBPQ96SI9 672 aaKnown RBP8.79□□□□□ -1
BEST3-205ENST00000488961 UTP14AQ9BVJ6 771 aaKnown RBP8.79□□□□□ -1
BEST3-205ENST00000488961 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
BEST3-205ENST00000488961 SH3BP1Q9Y3L3 701 aa8.79□□□□□ -1
BEST3-205ENST00000488961 JCADQ9P266 1359 aa8.78□□□□□ -1
BEST3-205ENST00000488961 SMC2O95347 1197 aa8.78□□□□□ -1
BEST3-205ENST00000488961 SLURP2P0DP57 97 aa8.78□□□□□ -1
BEST3-205ENST00000488961 PUM3Q15397 648 aaKnown RBP8.78□□□□□ -1
BEST3-205ENST00000488961 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
BEST3-205ENST00000488961 TBC1D9BQ66K14 1250 aa8.78□□□□□ -1
BEST3-205ENST00000488961 KRT40Q6A162 431 aa8.78□□□□□ -1
BEST3-205ENST00000488961 APOA5Q6Q788 366 aa8.78□□□□□ -1
BEST3-205ENST00000488961 FAM177A1Q8N128 213 aaPredicted RBP8.78□□□□□ -1
BEST3-205ENST00000488961 SMARCE1Q969G3 411 aa8.78□□□□□ -1
BEST3-205ENST00000488961 AATFQ9NY61 560 aaKnown RBP eCLIP8.78□□□□□ -1
BEST3-205ENST00000488961 MYH13Q9UKX3 1938 aa8.78□□□□□ -1
BEST3-205ENST00000488961 BCL9O00512 1426 aa8.78□□□□□ -1
BEST3-205ENST00000488961 GSG1L2A8MUP6 293 aa8.78□□□□□ -1
BEST3-205ENST00000488961 ZSCAN26Q16670 478 aa8.78□□□□□ -1
BEST3-205ENST00000488961 CFAP45Q9UL16 551 aa8.78□□□□□ -1
BEST3-205ENST00000488961 RRP15Q9Y3B9 282 aaKnown RBP8.78□□□□□ -1
BEST3-205ENST00000488961 LAMB4A4D0S4 1761 aa8.78□□□□□ -1
BEST3-205ENST00000488961 PARP4Q9UKK3 1724 aaKnown RBP8.77□□□□□ -1
BEST3-205ENST00000488961 WNT7AO00755 349 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 SPTLC2O15270 562 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 ZBTB43O43298 467 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 CDC25AP30304 524 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 IGHMBP2P38935 993 aaKnown RBP8.77□□□□□ -1.01
BEST3-205ENST00000488961 TTC31Q49AM3 519 aaPredicted RBP8.77□□□□□ -1.01
BEST3-205ENST00000488961 MYSM1Q5VVJ2 828 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 SRLQ86TD4 932 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 TRMT44Q8IYL2 757 aaKnown RBP8.77□□□□□ -1.01
BEST3-205ENST00000488961 EEF2KMTQ96G04 330 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 VPS54Q9P1Q0 977 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 ANGEL1Q9UNK9 670 aaKnown RBP8.77□□□□□ -1.01
BEST3-205ENST00000488961 CCDC69A6NI79 296 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 CAMTA2O94983 1202 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 SLC5A1P13866 664 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 PRDX5P30044 214 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 ZNF75DP51815 510 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 EIF5P55010 431 aaKnown RBP8.77□□□□□ -1.01
BEST3-205ENST00000488961 UVSSAQ2YD98 709 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 ZNF34Q8IZ26 560 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 TXLNBQ8N3L3 684 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 FBXO18Q8NFZ0 1043 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 SALL1Q9NSC2 1324 aa8.77□□□□□ -1.01
BEST3-205ENST00000488961 TCRBV5S4A2TA0A5A2 114 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 CCDC189A1A4V9 331 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 GNPATO15228 680 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 HMGB1P09429 215 aaKnown RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 PFKFB1P16118 471 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 KIF23Q02241 960 aaPredicted RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 GRIK5Q16478 980 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 EARS2Q5JPH6 523 aaKnown RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 MFSD6Q6ZSS7 791 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 LINC00301Q8NCQ3 95 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 LY9Q9HBG7 655 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 GPR108Q9NPR9 543 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 SLC12A7Q9Y666 1083 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 MYH7P12883 1935 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 ZNF202O95125 648 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 PLEKHA8P1O95397 391 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 IL6STP40189 918 aaPredicted RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 IARSP41252 1262 aaKnown RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 PLA2G4AP47712 749 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 MAP2K1Q02750 393 aaPredicted RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 TICAM2Q86XR7 235 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 SMYD4Q8IYR2 804 aaPredicted RBP8.76□□□□□ -1.01
BEST3-205ENST00000488961 GOLGA6L1Q8N7Z2 621 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 CEP120Q8N960 986 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 LPIN2Q92539 896 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 PLIN2Q99541 437 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 DEF6Q9H4E7 631 aa8.76□□□□□ -1.01
BEST3-205ENST00000488961 SH2B2O14492 632 aaPredicted RBP8.75□□□□□ -1.01
BEST3-205ENST00000488961 MAP3K12Q12852 859 aa8.75□□□□□ -1.01
BEST3-205ENST00000488961 DIXDC1Q155Q3 683 aa8.75□□□□□ -1.01
BEST3-205ENST00000488961 NBPF20Q3BBV1 942 aa8.75□□□□□ -1.01
BEST3-205ENST00000488961 OLFM4Q6UX06 510 aa8.75□□□□□ -1.01
BEST3-205ENST00000488961 DHX40Q8IX18 779 aaKnown RBP8.75□□□□□ -1.01
BEST3-205ENST00000488961 ZNF384Q8TF68 577 aa8.75□□□□□ -1.01
BEST3-205ENST00000488961 MRPS27Q92552 414 aaKnown RBP8.75□□□□□ -1.01
BEST3-205ENST00000488961 ZNF274Q96GC6 653 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms