RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
SF3A3-207ENST00000488934 DDX10Q13206 875 aaKnown RBP6.77□□□□□ -1.33
SF3A3-207ENST00000488934 OCLNQ16625 522 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 KCTD17Q8N5Z5 321 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 PIGBQ92521 554 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 UBE2OQ9C0C9 1292 aaKnown RBP6.77□□□□□ -1.33
SF3A3-207ENST00000488934 TFCP2L1Q9NZI6 479 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 BCS1LQ9Y276 419 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.77□□□□□ -1.33
SF3A3-207ENST00000488934 MAP3K5Q99683 1374 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 UBR3Q6ZT12 1888 aa6.77□□□□□ -1.33
SF3A3-207ENST00000488934 MYBBP1AQ9BQG0 1328 aaKnown RBP6.76□□□□□ -1.33
SF3A3-207ENST00000488934 LOC102724428A0A0B4J2F2 783 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 INPP5BP32019 993 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 SIK1P57059 783 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 TBC1D8BQ0IIM8 1120 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 RAB44Q7Z6P3 723 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-207ENST00000488934 GSX2Q9BZM3 304 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 MTFR1LQ9H019 292 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 PPP1R1BQ9UD71 204 aaPredicted RBP6.76□□□□□ -1.33
SF3A3-207ENST00000488934 DMGDHQ9UI17 866 aaKnown RBP6.76□□□□□ -1.33
SF3A3-207ENST00000488934 COL24A1Q17RW2 1714 aa6.76□□□□□ -1.33
SF3A3-207ENST00000488934 SIPA1L3O60292 1781 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-207ENST00000488934 UBR2Q8IWV8 1755 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 GNAT3A8MTJ3 354 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 ATP2B4P23634 1241 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 PRKAR2BP31323 418 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 TEFQ10587 303 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 COX20Q5RI15 118 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 LINC00114Q6XXX2 140 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 TREML1Q86YW5 311 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 RTF1Q92541 710 aaKnown RBP6.75□□□□□ -1.33
SF3A3-207ENST00000488934 SLC52A2Q9HAB3 445 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 MAPK8IP3Q9UPT6 1336 aa6.75□□□□□ -1.33
SF3A3-207ENST00000488934 DLG5Q8TDM6 1919 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 RNMTO43148 476 aaKnown RBP6.74□□□□□ -1.33
SF3A3-207ENST00000488934 NFKB1P19838 968 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 SSFA2P28290 1259 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 POLD1P28340 1107 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 ZNF827Q17R98 1081 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 MTHFSDQ2M296 383 aaKnown RBP6.74□□□□□ -1.33
SF3A3-207ENST00000488934 MDFIQ99750 246 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 MKNK1Q9BUB5 465 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 IGFLR1Q9H665 355 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 PRDM6Q9NQX0 595 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 ATG3Q9NT62 314 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 ASAP1Q9ULH1 1129 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 PNPLA7Q6ZV29 1317 aa6.74□□□□□ -1.33
SF3A3-207ENST00000488934 TJP1Q07157 1748 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 M0R082 166 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 HTATSF1O43719 755 aaKnown RBP6.73□□□□□ -1.33
SF3A3-207ENST00000488934 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 HOXB4P17483 251 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-207ENST00000488934 WDR43Q15061 677 aaKnown RBP eCLIP6.73□□□□□ -1.33
SF3A3-207ENST00000488934 PRRT3Q5FWE3 981 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 GPAT2Q6NUI2 795 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 TTC5Q8N0Z6 440 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 ZNF417Q8TAU3 575 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 ZNF587Q96SQ5 575 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-207ENST00000488934 LRFN2Q9ULH4 789 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 MTMR7Q9Y216 660 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 RTCBQ9Y3I0 505 aaKnown RBP6.73□□□□□ -1.33
SF3A3-207ENST00000488934 CNTNAP4Q9C0A0 1308 aa6.73□□□□□ -1.33
SF3A3-207ENST00000488934 CEMIPQ8WUJ3 1361 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 LILRB5O75023 590 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 ZBTB7AO95365 584 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 RARAP10276 462 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 LMOD3Q0VAK6 560 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 RGL4Q8IZJ4 473 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 TEX13AQ9BXU3 409 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-207ENST00000488934 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
SF3A3-207ENST00000488934 C4AP0C0L4 1744 aa6.72□□□□□ -1.33
SF3A3-207ENST00000488934 KCPQ6ZWJ8 1503 aa6.71□□□□□ -1.33
SF3A3-207ENST00000488934 MSTNO14793 375 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 XYLBO75191 536 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 EGFRP00533 1210 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 KRT25Q7Z3Z0 450 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 CMTR1Q8N1G2 835 aaKnown RBP6.71□□□□□ -1.34
SF3A3-207ENST00000488934 LINC00116Q8NCU8 138 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 LGR6Q9HBX8 967 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 DNAJB12Q9NXW2 375 aaKnown RBP6.71□□□□□ -1.34
SF3A3-207ENST00000488934 STIM2Q9P246 746 aa6.71□□□□□ -1.34
SF3A3-207ENST00000488934 FNDC3AQ9Y2H6 1198 aaKnown RBP6.71□□□□□ -1.34
SF3A3-207ENST00000488934 MYH14Q7Z406 1995 aaKnown RBP6.71□□□□□ -1.34
SF3A3-207ENST00000488934 LAMB4A4D0S4 1761 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 BTBD11A6QL63 1104 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 ANP32CO43423 234 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 ALBP02768 609 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 SPATA31C1P0DKV0 1188 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 ITPK1Q13572 414 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 NAA30Q147X3 362 aaPredicted RBP6.7□□□□□ -1.34
SF3A3-207ENST00000488934 PLA2G4EQ3MJ16 856 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 TRAPPC3LQ5T215 181 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 B4GALNT3Q6L9W6 998 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 ZNF790Q6PG37 636 aa6.7□□□□□ -1.34
SF3A3-207ENST00000488934 DHX32Q7L7V1 743 aaKnown RBP6.7□□□□□ -1.34
SF3A3-207ENST00000488934 NPM2Q86SE8 214 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms