RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PHF20L1A8MW92 1017 aa18.13■□□□□ 0.49
CXCL12-207ENST00000488591 TM4SF4P48230 202 aa18.13■□□□□ 0.49
CXCL12-207ENST00000488591 SLFNL1Q499Z3 407 aa18.13■□□□□ 0.49
CXCL12-207ENST00000488591 NOL9Q5SY16 702 aaKnown RBP18.13■□□□□ 0.49
CXCL12-207ENST00000488591 APPBP2Q92624 585 aa18.13■□□□□ 0.49
CXCL12-207ENST00000488591 OTUD5Q96G74 571 aa18.13■□□□□ 0.49
CXCL12-207ENST00000488591 PICK1Q9NRD5 415 aa18.13■□□□□ 0.49
CXCL12-207ENST00000488591 FOXN1O15353 648 aa18.12■□□□□ 0.49
CXCL12-207ENST00000488591 CTNND1O60716 968 aaKnown RBP18.12■□□□□ 0.49
CXCL12-207ENST00000488591 POLR3DP05423 398 aaPredicted RBP18.12■□□□□ 0.49
CXCL12-207ENST00000488591 GTF2A2P52657 109 aa18.12■□□□□ 0.49
CXCL12-207ENST00000488591 PPATQ06203 517 aa18.12■□□□□ 0.49
CXCL12-207ENST00000488591 PLEKHM2Q8IWE5 1019 aa18.12■□□□□ 0.49
CXCL12-207ENST00000488591 SCYL3Q8IZE3 742 aa18.12■□□□□ 0.49
CXCL12-207ENST00000488591 ATP8A2Q9NTI2 1148 aa18.12■□□□□ 0.49
CXCL12-207ENST00000488591 MYH1P12882 1939 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 GJA5P36382 358 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 PUS7LQ9H0K6 701 aaKnown RBP18.11■□□□□ 0.49
CXCL12-207ENST00000488591 OSBPL3Q9H4L5 887 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 MCM9Q9NXL9 1143 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 SAGE1Q9NXZ1 904 aa18.11■□□□□ 0.49
CXCL12-207ENST00000488591 FAM196BA6NMK8 535 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 ALDH1A1P00352 501 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 CHGBP05060 677 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 PPIL2Q13356 520 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 TICAM2Q86XR7 235 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 AMOTL1Q8IY63 956 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 SDR42E1Q8WUS8 393 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 CNKSR2Q8WXI2 1034 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 RNF186Q9NXI6 227 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 SLC4A4Q9Y6R1 1079 aa18.1■□□□□ 0.49
CXCL12-207ENST00000488591 PRKAB2O43741 272 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 TRPA1O75762 1119 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 SLURP2P0DP57 97 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 SLC4A8Q2Y0W8 1093 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 METTL16Q86W50 562 aaKnown RBP18.09■□□□□ 0.49
CXCL12-207ENST00000488591 OSBP2Q969R2 916 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 RILPL2Q969X0 211 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 EHD4Q9H223 541 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
CXCL12-207ENST00000488591 SERPINB13Q9UIV8 391 aa18.09■□□□□ 0.49
CXCL12-207ENST00000488591 PCNTO95613 3336 aa18.08■□□□□ 0.49
CXCL12-207ENST00000488591 IRF6O14896 467 aa18.08■□□□□ 0.48
CXCL12-207ENST00000488591 CETPP11597 493 aa18.08■□□□□ 0.48
CXCL12-207ENST00000488591 PTPRAP18433 802 aa18.08■□□□□ 0.48
CXCL12-207ENST00000488591 GNAT2P19087 354 aa18.08■□□□□ 0.48
CXCL12-207ENST00000488591 CAP2P40123 477 aa18.08■□□□□ 0.48
CXCL12-207ENST00000488591 SNAPC2Q13487 334 aa18.08■□□□□ 0.48
CXCL12-207ENST00000488591 STRBPQ96SI9 672 aaKnown RBP18.08■□□□□ 0.48
CXCL12-207ENST00000488591 NAV1Q8NEY1 1877 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 CCL15-CCL14A0A0B4J2E2 113 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 TESPA1A2RU30 521 aaPredicted RBP18.07■□□□□ 0.48
CXCL12-207ENST00000488591 HSPA8P11142 646 aaKnown RBP18.07■□□□□ 0.48
CXCL12-207ENST00000488591 LBX1P52954 281 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 CCL15Q16663 113 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 IFNL1Q8IU54 200 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 MS4A4AQ96JQ5 239 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 TAOK2Q9UL54 1235 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 ZHX2Q9Y6X8 837 aa18.07■□□□□ 0.48
CXCL12-207ENST00000488591 DOCK1Q14185 1865 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 GPAA1O43292 621 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 ZMYM1Q5SVZ6 1142 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 GIMAP6Q6P9H5 292 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 TBC1D2Q9BYX2 928 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 PRDM10Q9NQV6 1147 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 GINM1Q9NU53 330 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 TSKSQ9UJT2 592 aa18.06■□□□□ 0.48
CXCL12-207ENST00000488591 LAMB1P07942 1786 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 M0R2C6 588 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 CXCL11O14625 94 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 APPP05067 770 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 ASNSP08243 561 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 PLCD1P51178 756 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
CXCL12-207ENST00000488591 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 DNAJC18Q9H819 358 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 KCNH4Q9UQ05 1017 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 SIPA1L1O43166 1804 aa18.05■□□□□ 0.48
CXCL12-207ENST00000488591 USP17L5A8MUK1 530 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 PATL2C9JE40 543 aaKnown RBP18.04■□□□□ 0.48
CXCL12-207ENST00000488591 USP17L12C9JPN9 530 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 USP17L21D6R901 530 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 PDE4AP27815 886 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 TATDN1Q6P1N9 297 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 BRI3BPQ8WY22 251 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 CCDC136Q96JN2 1154 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 AS3MTQ9HBK9 375 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 HELLSQ9NRZ9 838 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 ARPP21Q9UBL0 812 aaPredicted RBP18.04■□□□□ 0.48
CXCL12-207ENST00000488591 SWAP70Q9UH65 585 aa18.04■□□□□ 0.48
CXCL12-207ENST00000488591 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
CXCL12-207ENST00000488591 IGF2BP3O00425 579 aaKnown RBP eCLIP18.03■□□□□ 0.48
CXCL12-207ENST00000488591 TBC1D8O95759 1140 aa18.03■□□□□ 0.48
CXCL12-207ENST00000488591 CERKLQ49MI3 558 aaPredicted RBP18.03■□□□□ 0.48
CXCL12-207ENST00000488591 C12orf60Q5U649 245 aa18.03■□□□□ 0.48
CXCL12-207ENST00000488591 SEC62Q99442 399 aaKnown RBP18.03■□□□□ 0.48
CXCL12-207ENST00000488591 PTPN18Q99952 460 aa18.03■□□□□ 0.48
CXCL12-207ENST00000488591 AFG3L2Q9Y4W6 797 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms