RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 IREB2P48200 963 aaKnown RBP14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 PRMT2P55345 433 aa14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 LACTBP83111 547 aaPredicted RBP14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 PI16Q6UXB8 463 aa14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 ANKRD13AQ8IZ07 590 aa14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 APPBP2Q92624 585 aa14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 IL25Q9H293 177 aa14.4□□□□□ -0.1
HLA-DOB-209ENST00000488325 IGSF3O75054 1194 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 GNRH1P01148 92 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 BMP8BP34820 402 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 HSPA4P34932 840 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 MMP14P50281 582 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 UBE3CQ15386 1083 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 STRIP1Q5VSL9 837 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 KIAA0825Q8IV33 1275 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 FAM43AQ8N2R8 423 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 OPTNQ96CV9 577 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 GDF15Q99988 308 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 RNF208Q9H0X6 261 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 PIH1D3Q9NQM4 214 aaKnown RBP14.39□□□□□ -0.11
HLA-DOB-209ENST00000488325 CCL15-CCL14A0A0B4J2E2 113 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 USP2O75604 605 aaPredicted RBP14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 COL9A1P20849 921 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 ADD2P35612 726 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 CCL15Q16663 113 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 LRIT3Q3SXY7 679 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 SUPT20HL1Q3ZLR7 823 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 KIF2CQ99661 725 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 PPP2R3BQ9Y5P8 575 aa14.38□□□□□ -0.11
HLA-DOB-209ENST00000488325 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 GRK4P32298 578 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 NBPF12Q5TAG4 269 aaPredicted RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 SLC9C2Q5TAH2 1124 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 TMED8Q6PL24 325 aaPredicted RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 ZGPATQ8N5A5 531 aaKnown RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 U2AF1L4Q8WU68 220 aaKnown RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 MAP4K1Q92918 833 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 SNX21Q969T3 373 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 IL17RAQ96F46 866 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 LRP2BPQ9P2M1 347 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 TTC28Q96AY4 2481 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 MAST3O60307 1309 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 IRS2Q9Y4H2 1338 aa14.37□□□□□ -0.11
HLA-DOB-209ENST00000488325 ST18O60284 1047 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 TLR2O60603 784 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 PDE6AP16499 860 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 KLRK1P26718 216 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 PTH1RQ03431 593 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 SPTY2D1Q68D10 685 aaPredicted RBP14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 DSCC1Q9BVC3 393 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 SRRDQ9UH36 339 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 IQSEC3Q9UPP2 1182 aaPredicted RBP14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 RBM8AQ9Y5S9 174 aaKnown RBP14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 MYH7P12883 1935 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 RPTORQ8N122 1335 aa14.36□□□□□ -0.11
HLA-DOB-209ENST00000488325 OTOFQ9HC10 1997 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 GTF2A2P52657 109 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 DLGAP5Q15398 846 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 CCDC129Q6ZRS4 1044 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 ERICH6Q7L0X2 663 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 TDRD7Q8NHU6 1098 aaKnown RBP14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 WDR66Q8TBY9 1149 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 RAET1EQ8TD07 263 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 OSBP2Q969R2 916 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 SEC62Q99442 399 aaKnown RBP14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 BIN2Q9UBW5 565 aaPredicted RBP14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 DOCK2Q92608 1830 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
HLA-DOB-209ENST00000488325 M0R2C6 588 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 CTGFP29279 349 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 TTLL5Q6EMB2 1281 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 MAGEB6Q8N7X4 407 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 KCNB2Q92953 911 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 RAI14Q9P0K7 980 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 ABCF2Q9UG63 623 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 EYSQ5T1H1 3165 aa14.34□□□□□ -0.11
HLA-DOB-209ENST00000488325 CLRN2A0PK11 232 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 GPAA1O43292 621 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 SGPL1O95470 568 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 PSMC4P43686 418 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 UBXN2AP68543 259 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 CHAF1AQ13111 956 aaPredicted RBP14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 KRT32Q14532 448 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 CREB3L3Q68CJ9 461 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 TDHQ8IZJ6 230 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 TRIM47Q96LD4 638 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 TBC1D2Q9BYX2 928 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 COA1Q9GZY4 146 aa14.33□□□□□ -0.12
HLA-DOB-209ENST00000488325 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms