RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SEZ6Q53EL9 994 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 SGO2Q562F6 1265 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 ARMC10Q8N2F6 343 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 FBLIM1Q8WUP2 373 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 NKD1Q969G9 470 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 NT5C1AQ9BXI3 368 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 FANCGO15287 622 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 MAP4P27816 1152 aaKnown RBP6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 MCM4P33991 863 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 DOC2BQ14184 412 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 CDPF1Q6NVV7 123 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 CDC37L1Q7L3B6 337 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 CYFIP1Q7L576 1253 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 REC114Q7Z4M0 266 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 RNF214Q8ND24 703 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 GPRASP2Q96D09 838 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 SSBP4Q9BWG4 385 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 TPSG1Q9NRR2 321 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
ECHDC1-217ENST00000488087 GFRA2O00451 464 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 GRIN3BO60391 1043 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 ZC3H6P61129 1189 aaKnown RBP6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 PDE4BQ07343 736 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 NFKBIBQ15653 356 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 ZMYM1Q5SVZ6 1142 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 ZBTB37Q5TC79 503 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 SMYD4Q8IYR2 804 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 LRRC3Q9BY71 257 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 WNT10AQ9GZT5 417 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 GSX1Q9H4S2 264 aaPredicted RBP6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 LGR6Q9HBX8 967 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 BRMS1Q9HCU9 246 aa6.19□□□□□ -1.42
ECHDC1-217ENST00000488087 FAM95CA0A1B0GW59 222 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 PGRP06401 933 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 NEFMP07197 916 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 NFICP08651 508 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 GRK4P32298 578 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 RING1Q06587 406 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 MAP7Q14244 749 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 GK5Q6ZS86 529 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 BEND4Q6ZU67 534 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 ISL2Q96A47 359 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 SEMA6CQ9H3T2 930 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 ACSS3Q9H6R3 686 aa6.18□□□□□ -1.42
ECHDC1-217ENST00000488087 PLCG1P19174 1290 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 GJA8P48165 433 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 ZNF165P49910 485 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 NAALADL2Q58DX5 795 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 PAOXQ6QHF9 649 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 PRR23CQ6ZRP0 262 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 VPS37DQ86XT2 251 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 CLEC10AQ8IUN9 316 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 KCT2Q8NC54 265 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 ZNF507Q8TCN5 953 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 PCOLCE2Q9UKZ9 415 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 RAXQ9Y2V3 346 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 POLR3KQ9Y2Y1 108 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 PCDHB14Q9Y5E9 798 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 CORINQ9Y5Q5 1042 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 TACC3Q9Y6A5 838 aa6.17□□□□□ -1.42
ECHDC1-217ENST00000488087 NTF4P34130 210 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 MLECQ14165 292 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 FBXW10Q5XX13 1052 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 SLITRK4Q8IW52 837 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 RASGRP4Q8TDF6 673 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 TINF2Q9BSI4 451 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 SEMA6BQ9H3T3 888 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 GINM1Q9NU53 330 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 EFR3BQ9Y2G0 817 aa6.16□□□□□ -1.42
ECHDC1-217ENST00000488087 HMX2A2RU54 273 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 HTR3BO95264 441 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 HID1Q8IV36 788 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 EZH1Q92800 747 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 FERD3LQ96RJ6 166 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 FAM83CQ9BQN1 747 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 C7orf69Q9H7B7 122 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 FBRSQ9HAH7 460 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 REV1Q9UBZ9 1251 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 KLHL3Q9UH77 587 aa6.15□□□□□ -1.42
ECHDC1-217ENST00000488087 SCO2A0A1W2PP80 73 aa6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 DYNC1LI2O43237 492 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 DNAJA1P31689 397 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 NASPP49321 788 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 CLCQ05315 142 aa6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 COL9A2Q14055 689 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 UBE3DQ7Z6J8 389 aa6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 REXO1Q8N1G1 1221 aaKnown RBP6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 C8orf37Q96NL8 207 aa6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 ADAM30Q9UKF2 790 aa6.14□□□□□ -1.43
ECHDC1-217ENST00000488087 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 ARID5AQ03989 594 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 CDK5R2Q13319 367 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 NKG7Q16617 165 aa6.13□□□□□ -1.43
ECHDC1-217ENST00000488087 CCDC81Q6ZN84 652 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms