RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 AATFQ9NY61 560 aaKnown RBP eCLIP18.76■□□□□ 0.59
SEMA4D-219ENST00000486935 CPA4Q9UI42 421 aa18.76■□□□□ 0.59
SEMA4D-219ENST00000486935 MYH2Q9UKX2 1941 aa18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 FAM196BA6NMK8 535 aa18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 TBC1D12O60347 775 aa18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 ECM2O94769 699 aaPredicted RBP18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 CLASRPQ8N2M8 674 aaKnown RBP18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 ARHGAP39Q9C0H5 1083 aa18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 PIH1D3Q9NQM4 214 aaKnown RBP18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 AFG3L2Q9Y4W6 797 aa18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 LAMB1P07942 1786 aa18.75■□□□□ 0.59
SEMA4D-219ENST00000486935 GPAT2Q6NUI2 795 aa18.74■□□□□ 0.59
SEMA4D-219ENST00000486935 C17orf99Q6UX52 265 aa18.74■□□□□ 0.59
SEMA4D-219ENST00000486935 AACSQ86V21 672 aa18.74■□□□□ 0.59
SEMA4D-219ENST00000486935 PLCG2P16885 1265 aa18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 PDE4AP27815 886 aa18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 PPP4CP60510 307 aa18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 LACTBP83111 547 aaPredicted RBP18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 GADL1Q6ZQY3 521 aa18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 FASTKD5Q7L8L6 764 aaKnown RBP18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 ADGRA1Q86SQ6 560 aa18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 TGFBRAP1Q8WUH2 860 aa18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.73■□□□□ 0.59
SEMA4D-219ENST00000486935 A0A0G2JLL6 359 aaPredicted RBP18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 TRIM75PA6NK02 468 aa18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 IDH1O75874 414 aaKnown RBP18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 IFIT2P09913 472 aaKnown RBP18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 PRRT2Q7Z6L0 340 aaPredicted RBP18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 CCDC84Q86UT8 332 aaPredicted RBP18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 OTUD7AQ8TE49 926 aaPredicted RBP18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 PTCH2Q9Y6C5 1203 aa18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 NDUFB9Q9Y6M9 179 aa18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 AK9Q5TCS8 1911 aa18.72■□□□□ 0.59
SEMA4D-219ENST00000486935 TNRC18O15417 2968 aaPredicted RBP18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 CYP2C8P10632 490 aa18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 CYP7A1P22680 504 aa18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 MAPKAPK5Q8IW41 473 aa18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 ARMC5Q96C12 935 aa18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 PARK7Q99497 189 aaKnown RBP18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
SEMA4D-219ENST00000486935 POTEFA5A3E0 1075 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 IGSF3O75054 1194 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 PSMC4P43686 418 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 DYNLL1P63167 89 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 NBPF11Q86T75 865 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 DHX36Q9H2U1 1008 aaKnown RBP18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 ANTXR1Q9H6X2 564 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 HTTP42858 3142 aa18.7■□□□□ 0.58
SEMA4D-219ENST00000486935 FMNL1O95466 1100 aaPredicted RBP18.69■□□□□ 0.58
SEMA4D-219ENST00000486935 GNRH1P01148 92 aa18.69■□□□□ 0.58
SEMA4D-219ENST00000486935 RRP1BQ14684 758 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-219ENST00000486935 MAGEB6Q8N7X4 407 aa18.69■□□□□ 0.58
SEMA4D-219ENST00000486935 SAP30BPQ9UHR5 308 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-219ENST00000486935 HERC5Q9UII4 1024 aaKnown RBP18.69■□□□□ 0.58
SEMA4D-219ENST00000486935 MYCP01106 439 aaPredicted RBP18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 CTGFP29279 349 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 CAP2P40123 477 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 SPP2Q13103 211 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 MIGA1Q8NAN2 632 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 TRIM47Q96LD4 638 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 PALD1Q9ULE6 856 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 FLT1P17948 1338 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 ADGRA2Q96PE1 1338 aa18.68■□□□□ 0.58
SEMA4D-219ENST00000486935 MX1P20591 662 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 MAP3K12Q12852 859 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 FOXP4Q8IVH2 680 aaPredicted RBP18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 SH3TC2Q8TF17 1288 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 ZNF333Q96JL9 665 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 TMEM106CQ9BVX2 250 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 TRIM34Q9BYJ4 488 aa18.67■□□□□ 0.58
SEMA4D-219ENST00000486935 COL2A1P02458 1487 aaPredicted RBP18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 USP17L5A8MUK1 530 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 BCRP11274 1271 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 EN2P19622 333 aaPredicted RBP18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 HOXD10P28358 340 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 USP5P45974 858 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 PRMT2P55345 433 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 SLC4A8Q2Y0W8 1093 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 GPATCH3Q96I76 525 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 SLC45A1Q9Y2W3 748 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
SEMA4D-219ENST00000486935 DOCK2Q92608 1830 aa18.65■□□□□ 0.58
SEMA4D-219ENST00000486935 OSBPP22059 807 aa18.65■□□□□ 0.58
SEMA4D-219ENST00000486935 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
SEMA4D-219ENST00000486935 SMCR8Q8TEV9 937 aaPredicted RBP18.65■□□□□ 0.58
SEMA4D-219ENST00000486935 SRRDQ9UH36 339 aa18.65■□□□□ 0.58
SEMA4D-219ENST00000486935 AGTPBP1Q9UPW5 1226 aa18.65■□□□□ 0.58
SEMA4D-219ENST00000486935 PDE1AP54750 535 aa18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 FCGRTP55899 365 aa18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 METTL16Q86W50 562 aaKnown RBP18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 RAET1EQ8TD07 263 aa18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 ECHDC1Q9NTX5 307 aa18.64■□□□□ 0.57
SEMA4D-219ENST00000486935 CENPFP49454 3210 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms