RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 ANGEL1Q9UNK9 670 aaKnown RBP14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 ZMYND10O75800 440 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 FOXO4P98177 505 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 TOGARAM2Q6ZUX3 1019 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 FAM107BQ9H098 131 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 MAPK8IP1Q9UQF2 711 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 STRCQ7RTU9 1775 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 CC2D1AQ6P1N0 951 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 LINC00301Q8NCQ3 95 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 RGS22Q8NE09 1264 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 PCDHA5Q9Y5H7 936 aa14.03□□□□□ -0.16
SHROOM3-208ENST00000486758 CTAGE15A4D2H0 777 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 POLR2DO15514 142 aaKnown RBP14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 MARCH6O60337 910 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 CTAGE8P0CG41 777 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 MNAT1P51948 309 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 MTF1Q14872 753 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 CTAGE6Q86UF2 777 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 CTAGE4Q8IX94 777 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 ANKRD20A12PQ8NF67 263 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 PLIN2Q99541 437 aa14.02□□□□□ -0.16
SHROOM3-208ENST00000486758 RGPD8O14715 1765 aaPredicted RBP14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 UBE2Q2LH0YL09 131 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 H7C1W4 665 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 XBP1P17861 261 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 BAG6P46379 1132 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 RTN1Q16799 776 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 PIGBQ92521 554 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 CABP5Q9NP86 173 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 CARMIL3Q8ND23 1372 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 ARHGAP23Q9P227 1491 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 RFX5P48382 616 aaPredicted RBP14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 ATP2B2Q01814 1243 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 CTR9Q6PD62 1173 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 NBPF11Q86T75 865 aa14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 FMR1NBQ8N0W7 255 aaPredicted RBP14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 GPR161Q8N6U8 529 aaKnown RBP14.02□□□□□ -0.17
SHROOM3-208ENST00000486758 SOWAHDA6NJG2 315 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 MCAMP43121 646 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 EEF2KMTQ96G04 330 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 KCNH3Q9ULD8 1083 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 SLIT1O75093 1534 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 BTBD18B2RXH4 712 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 LCMT1Q9UIC8 334 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 HEG1Q9ULI3 1381 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 N4BP3O15049 544 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 TFRCP02786 760 aaKnown RBP14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 PDE6AP16499 860 aa14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 TTF1Q15361 905 aaPredicted RBP14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 TTC19Q6DKK2 380 aaPredicted RBP14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 LLPHQ9BRT6 129 aaKnown RBP14.01□□□□□ -0.17
SHROOM3-208ENST00000486758 CTAGE9A4FU28 777 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 FOXN1O15353 648 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 HDXQ7Z353 690 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 IGSF22Q8N9C0 903 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 TADA3O75528 432 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 GYG1P46976 350 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 SETQ01105 290 aaPredicted RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 FAM182BQ5T319 152 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 KIAA1328Q86T90 577 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 DIS3L2Q8IYB7 885 aaKnown RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 FBXO18Q8NFZ0 1043 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 SENP2Q9HC62 589 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 VAT1LQ9HCJ6 419 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 PIH1D3Q9NQM4 214 aaKnown RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 GNL3LQ9NVN8 582 aaKnown RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 DACH1Q9UI36 760 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 BAZ2BQ9UIF8 2168 aaKnown RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 CYP2D7A0A087X1C5 515 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 GOLGA6L9A6NEM1 432 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 OSBPL5Q9H0X9 879 aaPredicted RBP14□□□□□ -0.17
SHROOM3-208ENST00000486758 VPS16Q9H269 839 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 BRMS1Q9HCU9 246 aa14□□□□□ -0.17
SHROOM3-208ENST00000486758 SASH3O75995 380 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 SMYD4Q8IYR2 804 aaPredicted RBP13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 TFCP2L1Q9NZI6 479 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 N4BP1O75113 896 aaKnown RBP13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 CTSWP56202 376 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 CCDC70Q6NSX1 233 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 NKX2-3Q8TAU0 364 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 PSMB7Q99436 277 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 SAMSN1Q9NSI8 373 aaKnown RBP13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 AKR1B15C9JRZ8 316 aaPredicted RBP13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 ENC1O14682 589 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 CTDNEP1O95476 244 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 CDC5LQ99459 802 aaKnown RBP13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
SHROOM3-208ENST00000486758 UTRNP46939 3433 aa13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 IVLP07476 585 aa13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 MRPS25P82663 173 aaKnown RBP13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 ZBTB38Q8NAP3 1195 aaPredicted RBP13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 JADE2Q9NQC1 790 aa13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 RTEL1Q9NZ71 1219 aa13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 VPS54Q9P1Q0 977 aa13.98□□□□□ -0.17
SHROOM3-208ENST00000486758 MED23Q9ULK4 1368 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms