RNA–Protein interactions for RNA: ENST00000486388.5

UBP1-210, Transcript of upstream binding protein 1, human

TSL 3

Gene UBP1, Length 928 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBP1-210	ENST00000486388	COL11A2	P13942	1736 aa	Predicted RBP	6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	ITGB7	P26010	798 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	ADH6	P28332	368 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	PRKAR2B	P31323	418 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	GATA4	P43694	442 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	PLA2G4A	P47712	749 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	MAP1S	Q66K74	1059 aa	Predicted RBP	6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	KIF6	Q6ZMV9	814 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	SYNE4	Q8N205	404 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	LARGE2	Q8N3Y3	721 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	GOLGA2P5	Q9HBQ8	144 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	CEP126	Q9P2H0	1117 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	USP16	Q9Y5T5	823 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	NDUFB9	Q9Y6M9	179 aa		6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	WDR33	Q9C0J8	1336 aa	Known RBP	6.23	□□□□□ -1.41
UBP1-210	ENST00000486388	CEMIP	Q8WUJ3	1361 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	NPC1L1	Q9UHC9	1359 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	BCOR	Q6W2J9	1755 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	KLRG2	A4D1S0	409 aa	Predicted RBP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	RASSF10	A6NK89	507 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	FZD9	O00144	591 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	CA12	O43570	354 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	HTATSF1	O43719	755 aa	Known RBP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	GRM1	Q13255	1194 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	TAF7	Q15545	349 aa	Predicted RBP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	PPP1R42	Q7Z4L9	355 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	NLRP8	Q86W28	1048 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	NIM1K	Q8IY84	436 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	C1orf216	Q8TAB5	229 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	PNISR	Q8TF01	805 aa	Known RBP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	C7orf43	Q8WVR3	580 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	RBM17	Q96I25	401 aa	Known RBP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	PSMD1	Q99460	953 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	PNN	Q9H307	717 aa	Known RBP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
UBP1-210	ENST00000486388	ZNF541	Q9H0D2	1346 aa		6.22	□□□□□ -1.41
UBP1-210	ENST00000486388		A6NJR5	290 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	ERVV-1	B6SEH8	477 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	APBB1	O00213	710 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	ATXN7	O15265	892 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	PIP4K2A	P48426	406 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	MLLT1	Q03111	559 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	USP4	Q13107	963 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	USP50	Q70EL3	339 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	MCM10	Q7L590	875 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	NGEF	Q8N5V2	710 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	SUPT20H	Q8NEM7	779 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	ABHD8	Q96I13	439 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	CAPNS2	Q96L46	248 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	GPR101	Q96P66	508 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	ETNK1	Q9HBU6	452 aa		6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	AVEN	Q9NQS1	362 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	DNAAF2	Q9NVR5	837 aa	Known RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388	SIPA1L3	O60292	1781 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP1-210	ENST00000486388		A0A0C4DFX4	3053 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	CCDC85C	A6NKD9	419 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	PPIP5K2	O43314	1243 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	KCNQ3	O43525	872 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	SPATA31C1	P0DKV0	1188 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	HSPA8	P11142	646 aa	Known RBP	6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	MAP2K2	P36507	400 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	PHACTR3	Q96KR7	559 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	PLVAP	Q9BX97	442 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	KRTAP9-9	Q9BYP9	154 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	KRTAP9-4	Q9BYQ2	154 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	VPS33B	Q9H267	617 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	ADARB2	Q9NS39	739 aa	Known RBP	6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	PODXL2	Q9NZ53	605 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	DOLK	Q9UPQ8	538 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	RRP7A	Q9Y3A4	280 aa	Known RBP	6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	MAP3K15	Q6ZN16	1313 aa		6.2	□□□□□ -1.42
UBP1-210	ENST00000486388	KRTAP4-8	A0A0G2JLE6	195 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	DCDC2B	A2VCK2	349 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	PRAMEF22	A3QJZ6	481 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	SPDYE3	A6NKU9	549 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	TCERG1	O14776	1098 aa	Known RBP	6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	STAU1	O95793	577 aa	Known RBP	6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	MAPT	P10636	758 aa	Known RBP	6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	MYL6B	P14649	208 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	CD33	P20138	364 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	HOXA10	P31260	410 aa	Predicted RBP	6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	TNIP1	Q15025	636 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	CRY2	Q49AN0	593 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	PARP10	Q53GL7	1025 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	ARSJ	Q5FYB0	599 aa	Predicted RBP	6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	OLFM4	Q6UX06	510 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	FCHSD1	Q86WN1	690 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	BANK1	Q8NDB2	785 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	CRAMP1	Q96RY5	1269 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	BCL2L13	Q9BXK5	485 aa		6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	NIFK	Q9BYG3	293 aa	Known RBP	6.19	□□□□□ -1.42
UBP1-210	ENST00000486388	COL3A1	P02461	1466 aa	Predicted RBP	6.18	□□□□□ -1.42
UBP1-210	ENST00000486388	KHNYN	O15037	678 aa	Known RBP	6.18	□□□□□ -1.42
UBP1-210	ENST00000486388	GPR37L1	O60883	481 aa		6.18	□□□□□ -1.42
UBP1-210	ENST00000486388	CELF2	O95319	508 aa	Known RBP	6.18	□□□□□ -1.42
UBP1-210	ENST00000486388	ATP4A	P20648	1035 aa		6.18	□□□□□ -1.42
UBP1-210	ENST00000486388	GPT	P24298	496 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms