RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 CDK5RAP2Q96SN8 1893 aa23.9■■□□□ 1.42
LIMK1-206ENST00000486361 COL2A1P02458 1487 aaPredicted RBP23.89■■□□□ 1.42
LIMK1-206ENST00000486361 IRF6O14896 467 aa23.89■■□□□ 1.41
LIMK1-206ENST00000486361 NOL9Q5SY16 702 aaKnown RBP23.89■■□□□ 1.41
LIMK1-206ENST00000486361 MS4A4AQ96JQ5 239 aa23.89■■□□□ 1.41
LIMK1-206ENST00000486361 IGF2BP3O00425 579 aaKnown RBP eCLIP23.88■■□□□ 1.41
LIMK1-206ENST00000486361 RNF113AO15541 343 aaKnown RBP23.88■■□□□ 1.41
LIMK1-206ENST00000486361 CA12O43570 354 aa23.88■■□□□ 1.41
LIMK1-206ENST00000486361 TBC1D8O95759 1140 aa23.88■■□□□ 1.41
LIMK1-206ENST00000486361 CCDC84Q86UT8 332 aaPredicted RBP23.88■■□□□ 1.41
LIMK1-206ENST00000486361 SCYL3Q8IZE3 742 aa23.88■■□□□ 1.41
LIMK1-206ENST00000486361 EVX2Q03828 476 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 PPATQ06203 517 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 PPIL2Q13356 520 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 IFNL1Q8IU54 200 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 FOXP4Q8IVH2 680 aaPredicted RBP23.87■■□□□ 1.41
LIMK1-206ENST00000486361 CRACR2BQ8N4Y2 399 aaPredicted RBP23.87■■□□□ 1.41
LIMK1-206ENST00000486361 PTPN18Q99952 460 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 FSD1Q9BTV5 496 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 DNAJC18Q9H819 358 aa23.87■■□□□ 1.41
LIMK1-206ENST00000486361 CCL15-CCL14A0A0B4J2E2 113 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 CTNND1O60716 968 aaKnown RBP23.86■■□□□ 1.41
LIMK1-206ENST00000486361 HLA-DOAP06340 250 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 GTF2A2P52657 109 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 INHBEP58166 350 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 CCL15Q16663 113 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 PLEKHM2Q8IWE5 1019 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 BRI3BPQ8WY22 251 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 OSBP2Q969R2 916 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 R3HDMLQ9H3Y0 253 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 DCP1AQ9NPI6 582 aaPredicted RBP23.86■■□□□ 1.41
LIMK1-206ENST00000486361 PICK1Q9NRD5 415 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 SAGE1Q9NXZ1 904 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 HERC5Q9UII4 1024 aaKnown RBP23.86■■□□□ 1.41
LIMK1-206ENST00000486361 ZHX2Q9Y6X8 837 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 FOCADQ5VW36 1801 aa23.86■■□□□ 1.41
LIMK1-206ENST00000486361 POLR3DP05423 398 aaPredicted RBP23.85■■□□□ 1.41
LIMK1-206ENST00000486361 PTPRAP18433 802 aa23.85■■□□□ 1.41
LIMK1-206ENST00000486361 PLCD1P51178 756 aa23.85■■□□□ 1.41
LIMK1-206ENST00000486361 TRIM34Q9BYJ4 488 aa23.85■■□□□ 1.41
LIMK1-206ENST00000486361 PRDM10Q9NQV6 1147 aa23.85■■□□□ 1.41
LIMK1-206ENST00000486361 TESPA1A2RU30 521 aaPredicted RBP23.84■■□□□ 1.41
LIMK1-206ENST00000486361 CYP2D6P10635 497 aa23.84■■□□□ 1.41
LIMK1-206ENST00000486361 JAG1P78504 1218 aa23.84■■□□□ 1.41
LIMK1-206ENST00000486361 SHROOM1Q2M3G4 852 aaPredicted RBP23.84■■□□□ 1.41
LIMK1-206ENST00000486361 APPBP2Q92624 585 aa23.84■■□□□ 1.41
LIMK1-206ENST00000486361 SEC62Q99442 399 aaKnown RBP23.84■■□□□ 1.41
LIMK1-206ENST00000486361 SLC4A4Q9Y6R1 1079 aa23.84■■□□□ 1.41
LIMK1-206ENST00000486361 SIPA1L1O43166 1804 aa23.84■■□□□ 1.41
LIMK1-206ENST00000486361 MYH7P12883 1935 aa23.83■■□□□ 1.41
LIMK1-206ENST00000486361 M0R2C6 588 aa23.83■■□□□ 1.41
LIMK1-206ENST00000486361 CAP2P40123 477 aa23.83■■□□□ 1.41
LIMK1-206ENST00000486361 SNAPC2Q13487 334 aa23.83■■□□□ 1.41
LIMK1-206ENST00000486361 TTC6Q86TZ1 520 aa23.83■■□□□ 1.41
LIMK1-206ENST00000486361 METTL16Q86W50 562 aaKnown RBP23.83■■□□□ 1.41
LIMK1-206ENST00000486361 STRBPQ96SI9 672 aaKnown RBP23.83■■□□□ 1.41
LIMK1-206ENST00000486361 MYH1P12882 1939 aa23.82■■□□□ 1.4
LIMK1-206ENST00000486361 GDF11O95390 407 aa23.82■■□□□ 1.4
LIMK1-206ENST00000486361 ZFYP08048 801 aaPredicted RBP23.82■■□□□ 1.4
LIMK1-206ENST00000486361 PDE4AP27815 886 aa23.82■■□□□ 1.4
LIMK1-206ENST00000486361 EVI5LQ96CN4 794 aa23.82■■□□□ 1.4
LIMK1-206ENST00000486361 CYP2D7A0A087X1C5 515 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 TRIM6-TRIM34B2RNG4 842 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 SMIM22K7EJ46 135 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 CETPP11597 493 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 FAM43AQ8N2R8 423 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 SERPINB13Q9UIV8 391 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 KCNH4Q9UQ05 1017 aa23.81■■□□□ 1.4
LIMK1-206ENST00000486361 LRRFIP1Q32MZ4 808 aaKnown RBP23.8■■□□□ 1.4
LIMK1-206ENST00000486361 OTUD7BQ6GQQ9 843 aa23.8■■□□□ 1.4
LIMK1-206ENST00000486361 RILPL2Q969X0 211 aa23.8■■□□□ 1.4
LIMK1-206ENST00000486361 ATP8A2Q9NTI2 1148 aa23.8■■□□□ 1.4
LIMK1-206ENST00000486361 AFG3L2Q9Y4W6 797 aa23.8■■□□□ 1.4
LIMK1-206ENST00000486361 TRIM75PA6NK02 468 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 BTBD19C9JJ37 291 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 GPAA1O43292 621 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 ALDH1A1P00352 501 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 ZMYM1Q5SVZ6 1142 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 DYNLL2Q96FJ2 89 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 EHD4Q9H223 541 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 OSBPL3Q9H4L5 887 aa23.79■■□□□ 1.4
LIMK1-206ENST00000486361 USP17L12C9JPN9 530 aa23.78■■□□□ 1.4
LIMK1-206ENST00000486361 USP17L21D6R901 530 aa23.78■■□□□ 1.4
LIMK1-206ENST00000486361 CXCL11O14625 94 aa23.78■■□□□ 1.4
LIMK1-206ENST00000486361 NAV1Q8NEY1 1877 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 GSG1L2A8MUP6 293 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 SHMT1P34896 483 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 CRHR2Q13324 411 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 MOGSQ13724 837 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 TATDN1Q6P1N9 297 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 CCDC129Q6ZRS4 1044 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 DOCK1Q14185 1865 aa23.77■■□□□ 1.4
LIMK1-206ENST00000486361 CASP8AP2Q9UKL3 1982 aa23.76■■□□□ 1.39
LIMK1-206ENST00000486361 GPR25O00155 361 aa23.76■■□□□ 1.39
LIMK1-206ENST00000486361 GABPAQ06546 454 aa23.76■■□□□ 1.39
LIMK1-206ENST00000486361 SPP2Q13103 211 aa23.76■■□□□ 1.39
LIMK1-206ENST00000486361 CTR9Q6PD62 1173 aa23.76■■□□□ 1.39
LIMK1-206ENST00000486361 SLC44A5Q8NCS7 719 aa23.76■■□□□ 1.39
LIMK1-206ENST00000486361 USP17L5A8MUK1 530 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms