RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 A0A0G2JLL6 359 aaPredicted RBP22.39■■□□□ 1.17
PRPF40A-209ENST00000486100 CAP1Q01518 475 aa22.39■■□□□ 1.17
PRPF40A-209ENST00000486100 GPAT2Q6NUI2 795 aa22.39■■□□□ 1.17
PRPF40A-209ENST00000486100 PRRT2Q7Z6L0 340 aaPredicted RBP22.39■■□□□ 1.17
PRPF40A-209ENST00000486100 MIGA1Q8NAN2 632 aa22.39■■□□□ 1.17
PRPF40A-209ENST00000486100 PTPN22Q9Y2R2 807 aa22.39■■□□□ 1.17
PRPF40A-209ENST00000486100 CAP2P40123 477 aa22.38■■□□□ 1.17
PRPF40A-209ENST00000486100 MLLT1Q03111 559 aaPredicted RBP22.38■■□□□ 1.17
PRPF40A-209ENST00000486100 C17orf99Q6UX52 265 aa22.38■■□□□ 1.17
PRPF40A-209ENST00000486100 METTL16Q86W50 562 aaKnown RBP22.38■■□□□ 1.17
PRPF40A-209ENST00000486100 LRRCC1Q9C099 1032 aa22.38■■□□□ 1.17
PRPF40A-209ENST00000486100 DOCK2Q92608 1830 aa22.37■■□□□ 1.17
PRPF40A-209ENST00000486100 SOX10P56693 466 aa22.37■■□□□ 1.17
PRPF40A-209ENST00000486100 RRP1BQ14684 758 aaKnown RBP22.37■■□□□ 1.17
PRPF40A-209ENST00000486100 DNAJC2Q99543 621 aaKnown RBP22.37■■□□□ 1.17
PRPF40A-209ENST00000486100 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.37■■□□□ 1.17
PRPF40A-209ENST00000486100 PALD1Q9ULE6 856 aa22.37■■□□□ 1.17
PRPF40A-209ENST00000486100 TRIM75PA6NK02 468 aa22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 GOLIM4O00461 696 aa22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 ATP5JP18859 108 aa22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 KIF22Q14807 665 aa22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 CCDC84Q86UT8 332 aaPredicted RBP22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 TBC1D2Q9BYX2 928 aa22.36■■□□□ 1.17
PRPF40A-209ENST00000486100 HLA-DOAP06340 250 aa22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 USP5P45974 858 aa22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 GADL1Q6ZQY3 521 aa22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 PARK7Q99497 189 aaKnown RBP22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 BOLA2Q9H3K6 86 aa22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 DCTPP1Q9H773 170 aa22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 SAP30BPQ9UHR5 308 aaKnown RBP22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 CPA4Q9UI42 421 aa22.35■■□□□ 1.17
PRPF40A-209ENST00000486100 PDE6AP16499 860 aa22.34■■□□□ 1.17
PRPF40A-209ENST00000486100 CRACR2BQ8N4Y2 399 aaPredicted RBP22.34■■□□□ 1.17
PRPF40A-209ENST00000486100 RIOK1Q9BRS2 568 aaKnown RBP22.34■■□□□ 1.17
PRPF40A-209ENST00000486100 TRIM34Q9BYJ4 488 aa22.34■■□□□ 1.17
PRPF40A-209ENST00000486100 SLC45A1Q9Y2W3 748 aa22.34■■□□□ 1.17
PRPF40A-209ENST00000486100 MAST2Q6P0Q8 1798 aa22.34■■□□□ 1.17
PRPF40A-209ENST00000486100 ADGRA2Q96PE1 1338 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 MAGEB6P1A0A0J9YX57 407 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 USP17L5A8MUK1 530 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 SMARCA5O60264 1052 aaPredicted RBP22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 SPP2Q13103 211 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 ZNF280CQ8ND82 737 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 DNAJC18Q9H819 358 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 PAG1Q9NWQ8 432 aa22.33■■□□□ 1.17
PRPF40A-209ENST00000486100 GNRH1P01148 92 aa22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 CYP2C8P10632 490 aa22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 RRP1P56182 461 aaKnown RBP22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 EDC3Q96F86 508 aaKnown RBP22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 HAUS7Q99871 368 aa22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 ARHGAP39Q9C0H5 1083 aa22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 AS3MTQ9HBK9 375 aa22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 GINM1Q9NU53 330 aa22.32■■□□□ 1.16
PRPF40A-209ENST00000486100 ZNF532Q9HCE3 1301 aa22.31■■□□□ 1.16
PRPF40A-209ENST00000486100 TCRBV5S4A2TA0A5A2 114 aa22.31■■□□□ 1.16
PRPF40A-209ENST00000486100 ASNSP08243 561 aa22.31■■□□□ 1.16
PRPF40A-209ENST00000486100 PROCA1Q8NCQ7 364 aaPredicted RBP22.31■■□□□ 1.16
PRPF40A-209ENST00000486100 AGTPBP1Q9UPW5 1226 aa22.31■■□□□ 1.16
PRPF40A-209ENST00000486100 MYO5AQ9Y4I1 1855 aaKnown RBP22.3■■□□□ 1.16
PRPF40A-209ENST00000486100 BCRP11274 1271 aa22.3■■□□□ 1.16
PRPF40A-209ENST00000486100 JAG1P78504 1218 aa22.3■■□□□ 1.16
PRPF40A-209ENST00000486100 TTC6Q86TZ1 520 aa22.3■■□□□ 1.16
PRPF40A-209ENST00000486100 YTHDC1Q96MU7 727 aaKnown RBP22.3■■□□□ 1.16
PRPF40A-209ENST00000486100 WDR18Q9BV38 432 aa22.3■■□□□ 1.16
PRPF40A-209ENST00000486100 PSMC4P43686 418 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 SLC4A8Q2Y0W8 1093 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 SH3D19Q5HYK7 790 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 ARMC5Q96C12 935 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 CRNKL1Q9BZJ0 848 aaKnown RBP22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 EHD4Q9H223 541 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 PCDHB15Q9Y5E8 787 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 PTCH2Q9Y6C5 1203 aa22.29■■□□□ 1.16
PRPF40A-209ENST00000486100 PRMT2P55345 433 aa22.28■■□□□ 1.16
PRPF40A-209ENST00000486100 TREML2Q5T2D2 321 aa22.28■■□□□ 1.16
PRPF40A-209ENST00000486100 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.28■■□□□ 1.16
PRPF40A-209ENST00000486100 ECHDC1Q9NTX5 307 aa22.28■■□□□ 1.16
PRPF40A-209ENST00000486100 SERPINB13Q9UIV8 391 aa22.28■■□□□ 1.16
PRPF40A-209ENST00000486100 DOCK1Q14185 1865 aa22.28■■□□□ 1.16
PRPF40A-209ENST00000486100 GDF11O95390 407 aa22.27■■□□□ 1.16
PRPF40A-209ENST00000486100 HOXD10P28358 340 aa22.27■■□□□ 1.16
PRPF40A-209ENST00000486100 CTGFP29279 349 aa22.27■■□□□ 1.16
PRPF40A-209ENST00000486100 ADD2P35612 726 aa22.27■■□□□ 1.16
PRPF40A-209ENST00000486100 HMGCS2P54868 508 aa22.27■■□□□ 1.16
PRPF40A-209ENST00000486100 TATDN1Q6P1N9 297 aa22.27■■□□□ 1.16
PRPF40A-209ENST00000486100 ECM2O94769 699 aaPredicted RBP22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 FMNL1O95466 1100 aaPredicted RBP22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 BACE1P56817 501 aa22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 PABPC4Q13310 644 aaKnown RBP eCLIP22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 NBPF11Q86T75 865 aa22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 SMCR8Q8TEV9 937 aaPredicted RBP22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 TRIM47Q96LD4 638 aa22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 PNMA3Q9UL41 463 aa22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 ZBTB21Q9ULJ3 1066 aa22.26■■□□□ 1.15
PRPF40A-209ENST00000486100 C19orf81C9J6K1 198 aa22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 POLR3DP05423 398 aaPredicted RBP22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 PLCD1P51178 756 aa22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 UBE3CQ15386 1083 aa22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 SHROOM1Q2M3G4 852 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms